Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun3292g00001 ATGAGCTTAAAAAAGGAGATGAGATCTCTCCAACACTCATCAAAGCCATTGAGGATTCCCATGTATCTATTCTCATCTTCTCAGAAAACTATGCTTCCTCAAAGTGATCCGTCACACGTGAGGAACCAGACTGGGAGTTACAAGGAAGCCTTTGAAAAACATAAGCGAGAGTTGAAGGACAATTATGACAGGTTGAAGATATGGAAAGCTGCTCTCACTGAGGCAGCTAGTTTAGTTGGTTGCGACTTTCAAAATTACAGGACTGAATCAGACTTCATTAAGGACATTGTCAAAGATGTTTTGCAGAAACTGAATCGTAAGTACCAATATGAAACTAAGGGGCTTGTTGGATTTGAGAAGACTTATGAACAAATTGAATCAATGCTGAAAATTGGGTCAAATGAAGTTATAGTCCTTGGAATATGGGGCATGGGTGGCATAGGAAAGACAACCCTTGCTAAGGCTTTATTTGCCAAACTGCGTTCCCAATTCGAAGGTTGTTGCTTCCTCAATGTAAAGGATGAGTCAAACAAGTATGGACTTGATGTTGTATACTCCAAATTTTTTTCTACATTGTTAGAGGAAGAAAATCTTCATCCTGGTGCATCCTACATAGAATCCCCTTTTTCCTTGAGAAGGATTGCCCGTAAAAAGCTACTAAGTTTGACTGTCTTCAGAGAAAAACATCCTGAATTTGGATATGAAGATCTATCAGAAAGTGTAATTGTCTATTGCAAAGGCAATCCTCTGGCTTTAAAACTTATAGGTGCAAATCTCCGTTCAAGAGGCAAAGAAGCATGGGAAAATGAATTGAAAAAGCTAGAAAAGAAAGTGGGATAG 840 0.3881 MSLKKEMRSLQHSSKPLRIPMYLFSSSQKTMLPQSDPSHVRNQTGSYKEAFEKHKRELKDNYDRLKIWKAALTEAASLVGCDFQNYRTESDFIKDIVKDVLQKLNRKYQYETKGLVGFEKTYEQIESMLKIGSNEVIVLGIWGMGGIGKTTLAKALFAKLRSQFEGCCFLNVKDESNKYGLDVVYSKFFSTLLEEENLHPGASYIESPFSLRRIARKKLLSLTVFREKHPEFGYEDLSESVIVYCKGNPLALKLIGANLRSRGKEAWENELKKLEKKVG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun3292g00001 279 Gene3D - 215 278 IPR042197 -
Vifaun3292g00001 279 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 218 276 IPR044974 GO:0006952
Vifaun3292g00001 279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 277 IPR027417 -
Vifaun3292g00001 279 Gene3D - 115 205 IPR027417 -
Vifaun3292g00001 279 Gene3D - 26 110 IPR035897 -
Vifaun3292g00001 279 Pfam TIR domain 34 113 IPR000157 GO:0007165
Vifaun3292g00001 279 Pfam NB-ARC domain 119 178 IPR002182 GO:0043531
Vifaun3292g00001 279 Pfam NB-ARC domain 218 277 IPR002182 GO:0043531
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun3292g00001 63 222 WRKY Transcription Factor Family AT4G12020 35.404 3.19e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun3292g00001 - - cam:101499873 278.485