Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun3151g00005 ATGGCAATCATACATCAAGGAAACCATTCCATCTTGAAACTTTGTTGTTCATCAAACCGTGCAATAACCTTAATACAAAAGGTTATAGCAGAAGTTATTGGAACATATTTTCTTGTATTTGCAGGTTGTGGTGTTGTAGCAGTGGACAAAATCTATGGCTCCGTAACATTTCCAGGTATATGCATCACTTGGGGTTTGGTTGTAACAGTCATGTGTTACTCAGTTGGTCATATCTCCGGAGGACTCTTCAACCCTGCGGTTACCATAACTTGGGCCATCTTTCGCCGAATCAGAATCATAGAAGCTCCACTTTACATTGCTGCTGAGTTACTCGGTTCAACACTTGCGAGTTTAACACTGTCTTTAATGTTTGATATTACGCCAAAATCATTTTTCGGAACTGTGCCAGTTGGATCGAGTGGTCAATCTTTAGCTATGGAGTTCATTATCAGTTTTCTGTTAATGTTTGTTATTTCAGCTGTTACTACGGATGATCGAGCAGTGGATGATTCGGCGAGTATTGCAGTTGGAATGACGATAACGTTGAATCTATTTATAGCAGGGCCTGTTTCGGGTGCATCGATGAATCCAGCGAGAAGTATTGGACCTGCAATTGTGATACATATTTACAAAGGTTTATGGATATATGTAGTTGGTCCAATTATTGGAGCTGTAGCTGGAGCACTTGCTTATAACTTTCTTAGATCGGTATACAAACCGAGAGCAGAAATAGCAGCAGAAACGACTCCTACGGGATTAACAAAGGACAATCCAAATTCAGAATTAATACCAGAAGAACCATTGAGGAGCATAAGTATTAGTTGA 825 0.3988 MAIIHQGNHSILKLCCSSNRAITLIQKVIAEVIGTYFLVFAGCGVVAVDKIYGSVTFPGICITWGLVVTVMCYSVGHISGGLFNPAVTITWAIFRRIRIIEAPLYIAAELLGSTLASLTLSLMFDITPKSFFGTVPVGSSGQSLAMEFIISFLLMFVISAVTTDDRAVDDSASIAVGMTITLNLFIAGPVSGASMNPARSIGPAIVIHIYKGLWIYVVGPIIGAVAGALAYNFLRSVYKPRAEIAAETTPTGLTKDNPNSELIPEEPLRSISIS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun3151g00005 274 PRINTS Major intrinsic protein family signature 64 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifaun3151g00005 274 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifaun3151g00005 274 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifaun3151g00005 274 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifaun3151g00005 274 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifaun3151g00005 274 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifaun3151g00005 274 NCBIfam MIP family channel protein 30 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifaun3151g00005 274 SUPERFAMILY Aquaporin-like 22 241 IPR023271 -
Vifaun3151g00005 274 Pfam Major intrinsic protein 21 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifaun3151g00005 274 Gene3D Glycerol uptake facilitator protein. 5 247 IPR023271 -
Vifaun3151g00005 274 CDD MIP 26 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifaun3151g00005 274 PANTHER AQUAPORIN NIP2-1 16 239 IPR034294 -
Vifaun3151g00005 274 MobiDBLite consensus disorder prediction 249 274 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun3151g00005 16 257 Major Intrinsic Protein MIP AT5G37820 62.041 9.15e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun3151g00005 K09874 - gmx:100791338 339.732