Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun28568g00001 ATGGGAAAGAAACGGAGCTCTTCTCAAATCGAGAAGCTTTCCACCACCGCCGCTCCCAAAGACGACCAGCCACTCACTCCCGCCCCGAAAGACGACGAAAAACCGTCGCCTCCACGTCCGGAAGAAGGCAAGGTTGAAGAACAAGATGATGAAGATTTATCATCCGCTTCTTCTTCATCTGAAGCGGAAGATGAAGATGAAGATGAAGCGGAAGATGATGACGAAGAAGACGATTCTTCCAAAAACGCTACTCCACCTGCCAACTCTCATCCGAATCCAAAAACCGAAGATGATTCGGACTCTGAAGACGAAGAAGAAACCGATTCAGACTCTGAAGATGAACCAGCCCCCAAACTGAAATCCCTCAACTCAAGCTCAAAGCCTCTTGATCAGATCAAATCAAAGGCCGAACCAAAACCCTCTGCCGCACCGGCCAGATCTGGAACCAAACGTCCTACTCCTGACAACGATCCCAAGCAAGCGAAGAAGACGAAAACTGGCGAGGAGGACAATAAGAAATCCGGTGATGATTCTAAAAGGCTGTTTCAGAGAGTGTTCAACGAGGATGATGAAATGGCCATTATCAAAGGTCTGTATGATTTCATTACAAAAACACAGACCGATCCTTTCAAGTACCACTCGGCTTTTTACGAGTTTGTGAAAAAGTCGATCCACTTTAAAGTTACACTGGAGCAGCTCAGAGATAAGATTCGGAGGCTGAAGCATAAATACGAGACGAAAGCAAAGACTGGAAAGACTCCTAATTTCTCCAAACAGAATGACCGGATAATATTTGAGTTTAGCCAAAAGATTTGGGGTGGTAAATTCAATGTCAATGAAGCCGAAGAGAAGGGAAAACCTAATGGGAAACTTTCCCAGAAGGAACCTGCTGCTAAGAAACCAAGAACAACTAAGAAATTGGTTTTGGAACCTGATTCGCCGATGGTTGTGAAGGAAACCAGGAAGGTGGAAAGAACTGATACGGAGAATCGCGGTCCGAGTTTGGCGTTGAATGAACTGATTCGTTTTGACGAGAGTGTAAGTGCAACTCGGGAGACTATAGGTGCGATGAAGAGGGGAATGGAGTTGATTGAGGAATCAGAGAGGAAAGAGTTGGCGAGAAGGTGGGAGAAGGTGCAAATTGCTGAAATGGAGGTGTTTAAGATGAGAGCTGATTTGGCTGTGGATCAGGCTATGTCGATATTGGATGCATTGAAGTCATCATCAAGCGATTAG 1236 0.4555 MGKKRSSSQIEKLSTTAAPKDDQPLTPAPKDDEKPSPPRPEEGKVEEQDDEDLSSASSSSEAEDEDEDEAEDDDEEDDSSKNATPPANSHPNPKTEDDSDSEDEEETDSDSEDEPAPKLKSLNSSSKPLDQIKSKAEPKPSAAPARSGTKRPTPDNDPKQAKKTKTGEEDNKKSGDDSKRLFQRVFNEDDEMAIIKGLYDFITKTQTDPFKYHSAFYEFVKKSIHFKVTLEQLRDKIRRLKHKYETKAKTGKTPNFSKQNDRIIFEFSQKIWGGKFNVNEAEEKGKPNGKLSQKEPAAKKPRTTKKLVLEPDSPMVVKETRKVERTDTENRGPSLALNELIRFDESVSATRETIGAMKRGMELIEESERKELARRWEKVQIAEMEVFKMRADLAVDQAMSILDALKSSSSD 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun28568g00001 411 MobiDBLite consensus disorder prediction 281 305 - -
Vifaun28568g00001 411 MobiDBLite consensus disorder prediction 7 21 - -
Vifaun28568g00001 411 Pfam Protein of unknown function, DUF573 182 273 IPR007592 GO:0006355
Vifaun28568g00001 411 PANTHER BNAANNG10740D PROTEIN-RELATED 57 402 IPR007592 GO:0006355
Vifaun28568g00001 411 MobiDBLite consensus disorder prediction 25 44 - -
Vifaun28568g00001 411 Coils Coil 230 250 - -
Vifaun28568g00001 411 MobiDBLite consensus disorder prediction 45 79 - -
Vifaun28568g00001 411 MobiDBLite consensus disorder prediction 152 179 - -
Vifaun28568g00001 411 MobiDBLite consensus disorder prediction 1 179 - -
Vifaun28568g00001 411 MobiDBLite consensus disorder prediction 98 112 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun28568g00001 95 273 GeBP Transcription Factor Family AT1G61730 40.860 4.47e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vifaun28568g00001 DUF573 1.5e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun28568g00001 - - tpra:123884521 310.457