Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun2713g00002 ATGTCATCATCTTCTACCTTCAAACTTTTTTTATTATTATTCATTCTTTGCATTCTCTTCCAAGAACACACTCATGCACTTACAAAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCTTCTCTTGATGATCTTGATTCAGCCACAAATTCACATTATGACTTACTTGCTTCAATCTTAGGAAGCCATGAGAAGGCAAAGGAAGCAGTTATGTATTCATACAATAAGCATATAAATGGATTTGCTGCATTACTTGAAGATGAAGAGGCATCAAAGATTGAAAAGAACTCCAATGTAGTTTCTGTTTTCTTGAGCAAAGAATATAAGTTGCATACTACAAGATCATGGGATTTTCTTGGATTGGAAAAAGATGGAGGAATTTCTCTTGATTCTGCTTGGTGGACGGCAAGATTTGGTGAAGATTCAATCATTGCTAATTTAGATTCTGGTGTTTGGCCAGAACATGTGAGCTTCAGCGGTACCGGCTACGGTCCGGTGCCATCAAAGTGGCGTGGGAATGGGGTCTGTGAGATTGATCATTTTATTACTTCTTCAAATGCAACAACATTCTGCAACAGAAAGCTAATTGGAGCAAGAATATTCAGCAAAAACTACGAAGCAAGATATGGAAATCTGAACCCTGCAAACCTCACAGCACGTGACTTCATTGGCCATGGAACACACACCTTATCAACAGCCGCAGGATGTCAAGAAGCTGATATTCTAGAAGCATTTGATCATGCTATAAATGACGGTGTTGATGTGATTTCAACTTCTTTGGGTGGTTCTAATCCTTATGTTGAAGCTTTGTTCACGGATGGGATTTCGATTGGGTCGTTTCATGCTGTTGCGAAGAATGTTGTTGTTGTTTGTTCTGCGGGGAATGATGGACCTGGTCCGAGAACTGTTACCAATGTTGCTCCTTGGTCTTTTACTGTTGCGGCTAGTACCATTGATAGGGAGTTTGTTAGCCAGATTTCTATTGGAGGCAAACATTATATTAAGGGTGCAAGTCTTAGTAAAGGCTTACCATCAGGTCCATCACAGAAAATATATCCAATGATTCATTCCATCGATGCTAGATTTCTTAATGCAACAATTCAAGATGCTCGTTATTGCAAGCCTAAAACACTTGATCCTACCAAAGTAAAGGGAAAGATATTAGTCTGCACTCGACTCGACGAAACAACATCTATTGCTCAAGGCTTTGAAGCTGCTCTTGCAGGGGCAATAGCTATTTTTGTGATCAATGATGAGAAAAGTGGAAGTATACTTCTAGCTGAGCCTCATCCTTTACCTGGTGCAAGTATGGACGCTAATCAGGATGACGATATTGATCAACGCGAATGGTTTGGAAAAGGTGGTACAGACAATAACGGTACCAGGAGAATGCTTGCTTACATGTCGACTTCAACAACGTATACTGGATTAAAGCCAGCTCCGGTTATGGCTGGATTTTCATCTAGGGGTCCTAGTGCAGTTCAGCCATTGATACTCAAGCCTGACATAACAGCTCCTGGAGTGAACATACTAGCTGCATATTCACTAGGCGTTAGTCCATCTAATCTACCGTCCGATCCACGTCGAATTCCTTACAATCTGCAACAAGGAACCTCAATGGCTTGTCCTCATGTTGCTGGAATTGTTGGTCTTCTCAAAACACTTCATCCTAGTTGGAGTTCAGCCGCCATCAAATCAGCCATCATGACTACAGCTACCACGCTAGATAACACCAATCAACCAATCCGTGACGCGTTCGATAAGATATCAACTCCATTCGAATATGGTTCTGGACATATTCAACCTAACCTCGCAATGGATCCTGGTCTTGTTTATGATCTGAACACAACAGATTACTTAAACTTCATATGTACTTCTACTCACAATCAAAATTTGCTAAAGTTCTTTAACAAAACCTCGTTCACTTGTCCTGAATATTACAACATTGAAGATCTTAACTATCCTTCAATCACCGTATATAATCGAGGGTTAAACACTATAAACATCACTCGTACCGTTACGAATGTTGGTCCTCCAAGCACATATGTTGCTCAAGTTCAACATCCAGAAGAGGTTAAGGTTAATGTTCAACCAAGTCCTTTAACTTTTACAGAAATTGGAGAAAAGAAAACATTTCAGGTGATTCTGGAAGTAACAGGTGTGCCTCCTAGTGGTTTTCCGGTGTTTGGGAACTTGAGATGGACAAATGGCAACCACATAGTGAGTAGTCCTATTGTGATTCTGTAA 2259 0.4037 MSSSSTFKLFLLLFILCILFQEHTHALTKTYIVYLGGHSHGPNPSLDDLDSATNSHYDLLASILGSHEKAKEAVMYSYNKHINGFAALLEDEEASKIEKNSNVVSVFLSKEYKLHTTRSWDFLGLEKDGGISLDSAWWTARFGEDSIIANLDSGVWPEHVSFSGTGYGPVPSKWRGNGVCEIDHFITSSNATTFCNRKLIGARIFSKNYEARYGNLNPANLTARDFIGHGTHTLSTAAGCQEADILEAFDHAINDGVDVISTSLGGSNPYVEALFTDGISIGSFHAVAKNVVVVCSAGNDGPGPRTVTNVAPWSFTVAASTIDREFVSQISIGGKHYIKGASLSKGLPSGPSQKIYPMIHSIDARFLNATIQDARYCKPKTLDPTKVKGKILVCTRLDETTSIAQGFEAALAGAIAIFVINDEKSGSILLAEPHPLPGASMDANQDDDIDQREWFGKGGTDNNGTRRMLAYMSTSTTYTGLKPAPVMAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLGVSPSNLPSDPRRIPYNLQQGTSMACPHVAGIVGLLKTLHPSWSSAAIKSAIMTTATTLDNTNQPIRDAFDKISTPFEYGSGHIQPNLAMDPGLVYDLNTTDYLNFICTSTHNQNLLKFFNKTSFTCPEYYNIEDLNYPSITVYNRGLNTINITRTVTNVGPPSTYVAQVQHPEEVKVNVQPSPLTFTEIGEKKTFQVILEVTGVPPSGFPVFGNLRWTNGNHIVSSPIVIL 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun2713g00002 752 ProSiteProfiles Serine proteases, subtilase domain profile. 119 610 - -
Vifaun2713g00002 752 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vifaun2713g00002 752 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Vifaun2713g00002 752 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vifaun2713g00002 752 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Vifaun2713g00002 752 FunFam Subtilisin-like protease SBT5.3 20 115 - -
Vifaun2713g00002 752 Pfam Fibronectin type-III domain 655 751 IPR041469 -
Vifaun2713g00002 752 Pfam Subtilase family 239 581 IPR000209 GO:0006508|GO:0008236
Vifaun2713g00002 752 SUPERFAMILY Subtilisin-like 114 614 IPR036852 GO:0004252|GO:0006508
Vifaun2713g00002 752 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Vifaun2713g00002 752 Gene3D Peptidase S8/S53 domain 146 239 IPR036852 GO:0004252|GO:0006508
Vifaun2713g00002 752 CDD PA_subtilisin_like 330 449 - -
Vifaun2713g00002 752 Gene3D - 627 752 - -
Vifaun2713g00002 752 Gene3D - 323 479 - -
Vifaun2713g00002 752 Gene3D Peptidase S8/S53 domain 240 623 IPR036852 GO:0004252|GO:0006508
Vifaun2713g00002 752 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 240 750 IPR045051 -
Vifaun2713g00002 752 CDD Peptidases_S8_3 112 577 IPR034197 -
Vifaun2713g00002 752 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 115 IPR037045 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun2713g00002 28 751 Subtilisin-like Serine Gene Family AT2G04160 48.564 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun2713g00002 - - gmx:100794135 1103.2