Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun27089g00001 ATGGATTCCAACAACGTTAAAATCCATGAACAAATCAAAGTTGTTCCTCAATCATCATCATCAACCCAAACAACAATAACCCCTCTCACTTTCTTTGACATATTTTGGTTAAAATTCCATCCTGTAGAACGTGTTTTCTTCTACACCCTCCCAAATTCACAATCACACCCCTCTTTTTTCTTTCAAGAAATTGTTCCAAATCTCAAATCTTCGCTCTCTTTAACCCTCCAACATTTTATCCCTTTAGCCGGTAAAATCGTTTGGCCTAATGATTCTTCAAAGCCATTCATCCAATTCAATCCCAATGAAGATGATAAGGGAGTTTCATTTCTCATTGCAGAATCTGATTTAGATTTCAATCTTGTCATTGAAAATTCACCACAGGATGCTTCGTTCTCTCGTTCTTTAATACCGCTTTTAGAATCAACCGATTCTTTTGCTTCTATTATCTCAATCCAGATAACCCTTTTTCCAAAAAGTGGTTTTTCCATTGGTATCACCACACACCATGCAGTTCTTGATGGAAAATCTACAACCATGTTTATCAAAGCATGGGCTTATCTATGCAACAAAACCATTGAAACCCTAGAAGAATCACCAACTTTGCTGCCAAAATTAGAGCCTTTATTCAATAGGGAAATCATCAAAGATCCAAATGAACTTTCTGTTAACTTCACAAATTACTGGATTCACGTCATGACACAGAACTTCCCAAATGAAGAAGCAAACAATTTGGAGATTCTCCCTTTTGAACCAAAACTGAAAGACTATGTCCGTGCTACGTTCAAGCTCACGCGTGAAGATTTGGATAAAATAAAGCAAAAGGTGTTATCCAAATGGGAAATATTCTATCCAAATGAATCAAAACCTCAAATGTTATCGTCTTTTGTTATCACCTGTGCTTATTTGCATGTTACTATTGCAAAAGCTATGAATGGAGTTGATAAGGAGAAAGAGAAATTTTCTTTTCTTTTCTCGGTAGATTGTAGAGCAAGGCTAGAACCACCAATACCAAATAACTATTTTGGTAATTGTGTTTGGGTGCAATTCCCGGATACTCAACCATTGGATTTTATCAAAGAAGATGGTGTTCTTTTAGTTGCTAAGTGTATTCATGAGAAAATTATGATGATAGATGAAAAGGGTGTTCTTGAAGGAGCCAAAGATTGCATTAATAAGTTTATTTCTTTGACAAGTGAAGGATATGAAGTTATGGGAGTGGCAGGGTCTAATAGATTTGGTGTTTATGAGACTGATTTTGGTTGGGGAAGGCCGGAAAAGGTGGAGATAGTGTCGATCGATAGAGGTTTAACAATTGGTTTGGCAGAGAGCAAAGATGGCAATGGTGGAATTGAAGTTGGAGTTGTTCTTAATAAAGATGTAATGGATCTCTTTAGCCATTTGTTTCTTGAAGGACTTTGA 1422 0.3636 MDSNNVKIHEQIKVVPQSSSSTQTTITPLTFFDIFWLKFHPVERVFFYTLPNSQSHPSFFFQEIVPNLKSSLSLTLQHFIPLAGKIVWPNDSSKPFIQFNPNEDDKGVSFLIAESDLDFNLVIENSPQDASFSRSLIPLLESTDSFASIISIQITLFPKSGFSIGITTHHAVLDGKSTTMFIKAWAYLCNKTIETLEESPTLLPKLEPLFNREIIKDPNELSVNFTNYWIHVMTQNFPNEEANNLEILPFEPKLKDYVRATFKLTREDLDKIKQKVLSKWEIFYPNESKPQMLSSFVITCAYLHVTIAKAMNGVDKEKEKFSFLFSVDCRARLEPPIPNNYFGNCVWVQFPDTQPLDFIKEDGVLLVAKCIHEKIMMIDEKGVLEGAKDCINKFISLTSEGYEVMGVAGSNRFGVYETDFGWGRPEKVEIVSIDRGLTIGLAESKDGNGGIEVGVVLNKDVMDLFSHLFLEGL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun27089g00001 473 Gene3D - 5 240 IPR023213 -
Vifaun27089g00001 473 FunFam Phenolic glucoside malonyltransferase 1 254 473 - -
Vifaun27089g00001 473 Gene3D - 253 473 IPR023213 -
Vifaun27089g00001 473 Pfam Transferase family 6 467 - -
Vifaun27089g00001 473 PANTHER - 6 473 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun27089g00001 6 471 Monolignol Biosynthesis Gene Families AT5G48930 25.417 4.05e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun27089g00001 - - tpra:123889238 704.131