Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun2311g00002 ATGAGCAACACCCATCTCAGAAAACCCATTAAACAAGTCCACATCCCAATCTTCACATCCACCCTCTTCCTCCTCTCCATGGCAACCCTGTCATTCCTCTTCCTCTTCCTCTGTCTCTCTTTCTCCCAATCTCACTCCTCCACCAATCTCCGCATCATCCAACTAGCCTGCCAAGCAACACGCTTCCCTCACCAATGCCAAACCTCCCTCTCCTCACTTTCTCACTACAACCTTCCCGCTAACCCTGACCCCCTCCACATCATCCATTCCGCAATCTCCCTTTCTTCCATTAACCTCAACGTCGCTAATTCAATGCTCACTTCCATCCTAGACGCTTCCGCAGGCAACCAAACCCGCGTTAATGTCGCCAAAAGCTGCCTCCAGGTCTTCCAATACTCTCATTATCGTATCTCTCTTGCCGTTGACGCGCTCTCGCGTGGCAGAATCAAGGACGCACGTGCCTTTATGACTGCTGCATTGTCTTATCAGTATAACTGTTGGTCTGGCCTTAAATACGCCAACGACACTTCCTTGGTTTTTAAAACTATGTCGTTTCTTGAATCTCTTACCGCCCTCTCCAGCAATGCTCTTAGCATGATTCTCTCTTATCATCTCTTTGGTAATGATACTGATTCCTGGAGGCCGCCTCGCACTGAGCGCGACGGTTTTTGGGAGGATTCCGGGTCGGCTGTGTTCGGCCAGGGACCCTCAGTGCCCACCAATCTTAAGCCGGATGCTAAGGTTTGTAAGGACACTGGTAATGGATGTTACGGGACGGTTCAGGAAGCAGTTGATGCGGCGCCTGATAATATGGACATTGGTGGAGGGAGGAGATTTGTGATACATATAAAGAAAGGGGTTTATGAAGAGACGATTAGGATTCCGTTAAGGAAGAGGAATCTTGTGTTTTTAGGGGATGGCATTGGTAAGACTGTCATCACTGGCTCTGCAAGTGTCGGACTACAAAAGGGGATGACAACATATGACTCTGCCACCGTAGGGGTTGTTGGGGATGGATTCATGGCCAAGGATCTCACAATCCAAAACACAGCAGGTGCAAATGCACACCAAGCAGTAGCATTTAGATCGGACAGTGATCTTTCTGTTATTGAGAATTGTGAATTCATAGGCAATCAAGATACTCTCTATGCTCATTCCCTCCGTCAGTTTTATAAATCTTGCCGTATCATAGGTAATGTGGACTTCATCTTTGGAAACTCAGCTTCATTCTTCCAAGACTGTGAAATCCTAGTCCAGCCTAGGCAAGCGAGGCCAAAGAAAGGGGAGAACAATGCCATTACTGCACATGGCAGAACAGACCCTGCTCAGTCGACAGGTTTTGTTTTCCACAATTGCTTGATTAATGGTACCGAAAAATATATGGAGTTGTATTATGACAAGCCGAAAGTACACAAGAACTATCTCGGAAGGCCATGGAAGGAGTATTCTAGAACACTTTTTATTAATTCATTCATGGAAGCCATAATTACACCACAGGGTTGGATGCCATGGAGTGGAGATTTTGCACTGAATACACTCTACTATGGGGAAATCGACAACTCTGGACCTGGTTCTAATTTGACTAAGAGAGTGTCCTGGAGTAGCCAGGTTCCTGCTGAACATGTGTACACGTATTCAGTGCAGGGTTTCATTCAAGGAGATGATTGGGATAGCCGGATCAGTTATTAG 1689 0.4665 MSNTHLRKPIKQVHIPIFTSTLFLLSMATLSFLFLFLCLSFSQSHSSTNLRIIQLACQATRFPHQCQTSLSSLSHYNLPANPDPLHIIHSAISLSSINLNVANSMLTSILDASAGNQTRVNVAKSCLQVFQYSHYRISLAVDALSRGRIKDARAFMTAALSYQYNCWSGLKYANDTSLVFKTMSFLESLTALSSNALSMILSYHLFGNDTDSWRPPRTERDGFWEDSGSAVFGQGPSVPTNLKPDAKVCKDTGNGCYGTVQEAVDAAPDNMDIGGGRRFVIHIKKGVYEETIRIPLRKRNLVFLGDGIGKTVITGSASVGLQKGMTTYDSATVGVVGDGFMAKDLTIQNTAGANAHQAVAFRSDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSASFFQDCEILVQPRQARPKKGENNAITAHGRTDPAQSTGFVFHNCLINGTEKYMELYYDKPKVHKNYLGRPWKEYSRTLFINSFMEAIITPQGWMPWSGDFALNTLYYGEIDNSGPGSNLTKRVSWSSQVPAEHVYTYSVQGFIQGDDWDSRISY 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun2311g00002 562 Pfam Plant invertase/pectin methylesterase inhibitor 52 199 IPR006501 GO:0004857
Vifaun2311g00002 562 FunFam Pectinesterase 4 242 562 - -
Vifaun2311g00002 562 PANTHER PECTINESTERASE 30 556 - -
Vifaun2311g00002 562 FunFam Probable pectinesterase/pectinesterase inhibitor 51 51 202 - -
Vifaun2311g00002 562 Gene3D - 239 562 IPR012334 -
Vifaun2311g00002 562 CDD PMEI-like_3 55 200 - -
Vifaun2311g00002 562 NCBIfam pectinesterase inhibitor domain 30 200 IPR006501 GO:0004857
Vifaun2311g00002 562 SUPERFAMILY Pectin lyase-like 248 558 IPR011050 -
Vifaun2311g00002 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 202 IPR035513 -
Vifaun2311g00002 562 Pfam Pectinesterase 246 554 IPR000070 GO:0030599|GO:0042545
Vifaun2311g00002 562 SMART PMEI_2 48 199 IPR006501 GO:0004857
Vifaun2311g00002 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 200 IPR035513 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun2311g00002 53 558 Carbohydrate Esterase AT5G09760 63.086 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun2311g00002 - - gmx:100802102 773.467