Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun21415g00001 ATGACTACTACATTCGTCCATAACCGGCGCCAGCACTCCGGCCACCGTGCAACGCCGGATAACATGTCCCGTTCATCGGACTTCAGCACTTCGAATCAATCAACCACGTCATCTTCAGGACGGAATCCTGTTGTTGCTGCTGCTTTGTCGGTTGCCGGATTGTTTGCAGCTTGTTTCACGCCGCCGGAGGCTAACAATTCCAAGAGCCTCGTCGTGGATTCCGAGGAGTTCAAATCTTCTTCTGGTTCTGTTGCATCAAATGCTTCAAGAGCTGGTAGTCAGAGAGGGCGTGGCTCAAGCCAAGGTACCAACGTCGGTTTATACAACACCACAATCCAGGGGAATGAGTCTGGCATTGTGAAGTACACCATGGAGGAAATTATTCAAGTTACCAAAAACTTCTCTCCTTCTTTCAAGATTGGTCAAGGTGGTTTTGGGGCAGTCTACAAGACCAAACTCCTGGATGGAACTATTGTCGCAGTAAAGCGAGCTAAGAAGAGTGTACACGAGAAACATTTAGGTTCGGAGTTCCAGAGCGAGGTACAAACACTATCACGAGTCGAGCATTTGAACTTGGTAAAGTTCTATGGATACTTGGAGCTAGGGGGTGAAAAAATCGTTGTTGTGGAGTATGTTCCTAATGGAACCCTGAGAGAACATCTAGATTGTATTCATGGAAATGTTCTCGACCTTGCTGCTCGTCTAGACATTGCAATTGATGTATCTCATGCTCTCACCTATCTTCATGTGTATATGGATCATCCCATCATTCATAGAGACATAAAGTCTTCGAACATTCTTCTCACTGAGAATTTTCGAGCAAAGGTAGCCGACTTTGGTTTTGCTAGGCAAGCACCAGACAGTGACTCTGGCATGACACACGTCTCCACCCAAGTTAAGGGAACAGCTGGTTACTTGGATCCTGAATACTTAAAAACCTATCAACTGACTGAAAAGAGTGACGTCTATTCATTCGGTGTTTTGCTTGTTGAACTTGTCACAGGAAGACGCCCGATTGAACCAAAATTTGAACTCAAAGAGAGAATAACAGTAAAATGGGCTATGAAGAGGTTTATTGAGGGAAACGCGGTCTCGGTCTTGGACCCAAGACTGGATCAAACTTCTGCAAATAATTTGGCCTTAGAAAAGATACTTGAACTAGCTTTACAATGCTTGGCTCCTCATAGGCAAAGCAGGCCTAGCATGAAGAGATGTGCAGAGATTCTTTGGGCCATCCGTAAGGATTATCGAGAGATATCGGCTTTAAACTTTCGATCGTATTCCACTACTTCCCAAAGAAGCACCTCACTGTGA 1314 0.4513 MTTTFVHNRRQHSGHRATPDNMSRSSDFSTSNQSTTSSSGRNPVVAAALSVAGLFAACFTPPEANNSKSLVVDSEEFKSSSGSVASNASRAGSQRGRGSSQGTNVGLYNTTIQGNESGIVKYTMEEIIQVTKNFSPSFKIGQGGFGAVYKTKLLDGTIVAVKRAKKSVHEKHLGSEFQSEVQTLSRVEHLNLVKFYGYLELGGEKIVVVEYVPNGTLREHLDCIHGNVLDLAARLDIAIDVSHALTYLHVYMDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITVKWAMKRFIEGNAVSVLDPRLDQTSANNLALEKILELALQCLAPHRQSRPSMKRCAEILWAIRKDYREISALNFRSYSTTSQRSTSL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun21415g00001 437 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Vifaun21415g00001 437 SMART serkin_6 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun21415g00001 437 Gene3D Phosphorylase Kinase; domain 1 100 211 - -
Vifaun21415g00001 437 PANTHER OS01G0750732 PROTEIN 34 417 - -
Vifaun21415g00001 437 Pfam Protein kinase domain 139 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun21415g00001 437 MobiDBLite consensus disorder prediction 1 41 - -
Vifaun21415g00001 437 ProSiteProfiles Protein kinase domain profile. 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun21415g00001 437 Gene3D Transferase(Phosphotransferase) domain 1 212 430 - -
Vifaun21415g00001 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Vifaun21415g00001 437 SUPERFAMILY Protein kinase-like (PK-like) 117 412 IPR011009 -
Vifaun21415g00001 437 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 212 423 - -
Vifaun21415g00001 437 CDD STKc_IRAK 140 409 - -
Vifaun21415g00001 437 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 92 211 - -
Vifaun21415g00001 437 MobiDBLite consensus disorder prediction 18 41 - -
Vifaun21415g00001 437 MobiDBLite consensus disorder prediction 81 105 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun21415g00001 121 412 Receptor kinase-like Gene Family AT1G30570 44.178 3.51e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Vifaun21415g00001 Pkinase 9.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun21415g00001 - - cam:101500599 694.501