Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun1959g00004 ATGGAGGAAACGCCTACACTCTTTCATGGAACAATTGAAGCTACCATCTTTAAGGCCACACCTTACACACCATTTCCTCTATTCAACTGCATAGGTAAAAATGGAAAGGCTGCATATGTGACCATCAAGATAGACAACAAAAAGGTTGCAAAAACAAGCAAAGAAAGAAACCGTGTTTGGAACCAAACCTTTCACATTCAATGTGCTCATCCAGCTGATTCAATTATCACAATTACATTGAAAACATCAAATTCCATGTTAGGAAAATACAGTATCAAGGCCCAACAACTTTTAAATGAAGCAAGTATAATCAACGGATTCTTCACTCTCCTCACGGAACAAGAAAAACCGAATCCAAAACTTAAATTGAAGTTTATATTATGGTTCAAGCCTGCAAAATTGGAAGAGTGTTTGGAAAAGGTACTAAGCAATGGGGAGTTTCAAGGGCTAAAGGATGAAAATTTTCCACAAAGGTCTAATTGTCATGTCAAACTTTATCATGATGCTCATCATTCTCCTACCTTTCAACCTCCCTTTGATCCATGTGGGGCTCCAAACAACCTATGGGAGGATATTTATAAAGCCATTGAAGGTGCAAAGCATATAGTTTATATTGCCGCTTGGTCCCTCAAACCCAAGATAGTTTTGGTAAGAGATCCTCATACAAAAATCCAACATGCAAGAGGAATGAATTTAGGTGACCTGTTGAAAAAGAAGGCAGATGAAGGAGTGGCTGTGAGAGTTATGCTTTGGGATGATGGAACATCATTGGCCTTAGTTAAGAACAAAGGTGTAATGAACACACATGATGAAGATGCTCTTACTTATTTCAATCACACAAAAGTAATATGCGAAAAGTGTCCTAGATTACACCACAAGTTTCCAACACTATTTGCTCACAACCAGAAAACTATAACAGTTGACATAAAAGTGGCTAAATCGGTTAGCGATAGAGAAATTATGAGCTTTGTTGGTGGTTTAGATTTGTGTGATGGTAGATATGATACAGAACAACATTCATTGTTTCAAACACTCATTAAGGAGTCACATTGTTATGACTTTTACCAACCAAACATTGAAGGAGCTAGCCTTAACAAAGGAGGACCAAGAGTTCCTTGGCATGATGCTCATGCTTGTGTTACCGGTGAAGCTGCTTGGGATGTGTTAACAAATTTTGAGCAACGATGGGCTAAGCAATGTGATCCATCTCTTCTGGTCCCTATTAGCACCTTGGTAAATCTCATGCCTCGAAGAAACTCAAACACTTCGATAGAAAGTAATTGGAAAGTACAAGTTCATAGGTCGATTGATCAAGCTTCGGTTGGTGATATATGTGGAAATTTCACTGCGGAGAGGAGTATCCATGAAGCTTATGTTGAAGCAATTAGGCATGCTGAGAGGTTTATATACATTGAAAACCAATATTTCATTGGTGGATGTCAATGGTGGAAAAAAGATAAGGATTGTGGTTGCACAAATCTAATTCCAATTGAAATTGCATTAAAAGTGGTAAGTAAGATCAAAGCAAAGGAGAGATTTGCAGTGTATATAGTTATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAATCTGTTCAAGATATATTGCATTGGACAAGAGAAACTGTGACAATGATGTATAGGTTGATTGGTGAAGCAATAAAACAAAGTGGTGAAATAGGACATCCAAGAGACTATTTGAATTTCTTTTGTCTTGCAAACAGAGAGCATAAGGGAAAAGGGGAGTATCTTCCACTAGATTTTCCCCATCCTGAAACACAATACTGGCATGCACAAAAGAGTAGAAGATTCATGGTTTATGTGCATTCGAAGCTCATGATAGGTTCAGCTAACATGAATCAAAGATCCATGGATGGGAAAAGGGACACTGAGATAGCCATAGGATGCTTCCAATCTCAAGATGAAGTTATGAAACAAATGAACCTTGGCGATGTTCATGCATACAGAATGTCACTATGGTATGAGCACACAAATAGTTTCAATGAGTTGTTCTTAGAGCCAGAAAGTTTGGAATGTGTGAAGAGGATGTGTTCCATTGGAGATCAAATGTGGGAAACCTACAGCAGTGAAGAAATTGTAGACATGGAAGGTGTGCACCTTGTTACTTACCCAATGAGAGTAACACAAGAAGGGTATGTGAAAGACTTGAGCAATGGAGTTTATTTTCCTGATACAAACTCTCTAGTGAAGGGGAAAAGATCTACATTGCCCACTAATGTTATGGCACCATCAAATGATGAAATTCATGAAGAGATACTTAAAGTCTCAAATGAAGAGGAAGATCCAATCCCTAGACCAAGAGCCAAGAGAAACACTGACAAGCCCAAACATTTTGAGAATTATGTAATGCCAAAATGTAAGAAAGGGGGTAGGGAGTAG 2400 0.3842 MEETPTLFHGTIEATIFKATPYTPFPLFNCIGKNGKAAYVTIKIDNKKVAKTSKERNRVWNQTFHIQCAHPADSIITITLKTSNSMLGKYSIKAQQLLNEASIINGFFTLLTEQEKPNPKLKLKFILWFKPAKLEECLEKVLSNGEFQGLKDENFPQRSNCHVKLYHDAHHSPTFQPPFDPCGAPNNLWEDIYKAIEGAKHIVYIAAWSLKPKIVLVRDPHTKIQHARGMNLGDLLKKKADEGVAVRVMLWDDGTSLALVKNKGVMNTHDEDALTYFNHTKVICEKCPRLHHKFPTLFAHNQKTITVDIKVAKSVSDREIMSFVGGLDLCDGRYDTEQHSLFQTLIKESHCYDFYQPNIEGASLNKGGPRVPWHDAHACVTGEAAWDVLTNFEQRWAKQCDPSLLVPISTLVNLMPRRNSNTSIESNWKVQVHRSIDQASVGDICGNFTAERSIHEAYVEAIRHAERFIYIENQYFIGGCQWWKKDKDCGCTNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGVPESESVQDILHWTRETVTMMYRLIGEAIKQSGEIGHPRDYLNFFCLANREHKGKGEYLPLDFPHPETQYWHAQKSRRFMVYVHSKLMIGSANMNQRSMDGKRDTEIAIGCFQSQDEVMKQMNLGDVHAYRMSLWYEHTNSFNELFLEPESLECVKRMCSIGDQMWETYSSEEIVDMEGVHLVTYPMRVTQEGYVKDLSNGVYFPDTNSLVKGKRSTLPTNVMAPSNDEIHEEILKVSNEEEDPIPRPRAKRNTDKPKHFENYVMPKCKKGGRE 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun1959g00004 799 Gene3D Endonuclease Chain A 444 649 - -
Vifaun1959g00004 799 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 125 IPR035892 -
Vifaun1959g00004 799 Gene3D C2 domain 29 129 IPR035892 -
Vifaun1959g00004 799 Pfam Phospholipase D C terminal 669 739 IPR024632 -
Vifaun1959g00004 799 Gene3D Endonuclease Chain A 175 426 - -
Vifaun1959g00004 799 MobiDBLite consensus disorder prediction 763 799 - -
Vifaun1959g00004 799 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Vifaun1959g00004 799 Pfam C2 domain 37 103 IPR000008 -
Vifaun1959g00004 799 SUPERFAMILY Phospholipase D/nuclease 148 407 - -
Vifaun1959g00004 799 PIRSF PLD_plant 4 749 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vifaun1959g00004 799 PANTHER PHOSPHOLIPASE D 7 734 IPR015679 -
Vifaun1959g00004 799 SUPERFAMILY Phospholipase D/nuclease 424 680 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun1959g00004 30 743 Phospholipase D Gene Family (Wang group) AT1G55180 58.856 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun1959g00004 K01115 - gmx:100812642 1211.44