Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun1959g00003 ATGGAGGAAACGCCTACACTCTTTCATGGAACAATTGAAGCTACCATCTTTAAGGCCACACCTTACACACCATTTCCTCTATTCAACTGCATAGGTAAAAATGGAAAGGCTGCATATGTGACCATCAAGATAGACAACAAAAAGGTTGCAAAAACAAGCAAAGAAAGAAACCGTGTTTGGAACCAAACCTTTCACATTCAATGTGCTCATCCAGCTGATTCAATTATCACAATTACATTGAAAACATCAAATTCCATGTTAGGAAAATACAGTATCAAGGCCCAACAACTTTTAAATGAAGCAAGTATAATCAACGGATTCTTCACTCTCCTCACGGAACAAGAAAAACCGAATCCAAAACTTAAATTGAAGTTTATATTATGGTTCAAGCCTGCAAAATTGGAAGAGTGTTTGGAAAAGGTACTAAGCAATGGGGAGTTTCAAGGGCTAAAGGATGAAAATTTTCCACAAAGGTCTAATTGTCATGTCAAACTTTATCATGATGCTCATCATTCTCCTACCTTTCAACCTCCCTTTGATCCATGTGGGGCTCCAAACAACCTATGGGAGGATATTTATAAAGCCATTGAAGGTGCAAAGCATATAGTTTATATTGCCGCTTGGTCCCTCAAACCCAAGATAGTTTTGGTAAGAGATCCTCATACAAAAATCCAACATGCAAGAGGAATGAATTTAGGTGACCTGTTGAAAAAGAAGGCAGATGAAGGAGTGGCTGTGAGAGTTATGCTTTGGGATGATGGAACATCATTGGCCTTAGTTAAGAACAAAGGTGTAATGAACACACATGATGAAGATGCTCTTACTTATTTCAATCACACAAAAGTAATATGCGAAAAGTGTCCTAGATTACACCACAAGTTTCCAACACTATTTGCTCACAACCAGAAAACTATAACAGTTGACATAAAAGTGGCTAAATCGGTTAGCGATAGAGAAATTATGAGCTTTGTTGGTGGTTTAGATTTGTGTGATGGTAGATATGATACAGAACAACATTCATTGTTTCAAACACTCATTAAGGAGTCACATTGTTATGACTTTTACCAACCAAACATTGAAGGAGCTAGCCTTAACAAAGGAGGACCAAGAGTTCCTTGGCATGATGCTCATGCTTGTGTTACCGGTGAAGCTGCTTGGGATGTGTTAACAAATTTTGAGCAACGATGGGCTAAGCAATGTGATCCATCTCTTCTGGTCCCTATTAGCACCTTGGTAAATCTCATGCCTCGAAGAAACTCAAACACTTCGATAGAAAGTAATTGGAAAGTACAAGTTCATAGGTCGATTGATCAAGCTTCGGTTGGTGATATATGTGGAAATTTCACTGCGGAGAGGAGTATCCATGAAGCTTATGTTGAAGCAATTAGGCATGCTGAGAGGTTTATATACATTGAAAACCAATATTTCATTGGTGGATGTCAATGGTGGAAAAAAGATAAGGATTGTGGTTGCACAAATCTAATTCCAATTGAAATTGCATTAAAAGTGGTAAGTAAGATCAAAGCAAAGGAGAGATTTGCAGTGTATATAGTTATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAATCTGTTCAAGATATATTGCATTGGACAAGAGAAACTGTGACAATGATGTATAGGTTGATTGGTGAAGCAATAAAACAAAGTGGTGAAATAGGACATCCAAGAGACTATTTGAATTTCTTTTGTCTTGCAAACAGAGAGCATAAGGGAAAAGGGGAGTATCTTCCACTAGATTTTCCCCATCCTGAAACACAATACTGGCATGCACAAAAGAGTAGAAGATTCATGGTTTATGTGCATTCGAAGCTCATGATAGTGGATGACATGTACATACTACTAGGTTCAGCTAACATGAATCAAAGATCCATGGATGGGAAAAGGGACACTGAGATAGCCATAGGATGCTTCCAATCTCAAGATGAAGTTATGAAACAAATGAACCTTGGCGATGTTCATGCATACAGAATGTCACTATGGTATGAGCACACAAATAGTTTCAATGAGTTGTTCTTAGAGCCAGAAAGTTTGGAATGTGTGAAGAGGATGTGTTCCATTGGAGATCAAATGTGGGAAACCTACAGCAGTGAAGAAATTGTAGACATGGAAGGTGTGCACCTTGTTACTTACCCAATGAGAGTAACACAAGAAGGGTATGTGAAAGACTTGAGCAATGGAGTTTATTTTCCTGATACAAACTCTCTAGTGAAGGGGAAAAGATCTACATTGCCCACTAATGTTATGGCACCATCAAATGATGAAATTCATGAAGAGATACTTAAAGTCTCAAATGAAGAGGAAGATCCAATCCCTAGACCAAGAGCCAAGAGAAACACTGACAAGCCCAAACATTTTGAGAATTATGTAATGCCAAAATGTAAGAAAGGGGGTAGGGAGTAG 2424 0.3841 MEETPTLFHGTIEATIFKATPYTPFPLFNCIGKNGKAAYVTIKIDNKKVAKTSKERNRVWNQTFHIQCAHPADSIITITLKTSNSMLGKYSIKAQQLLNEASIINGFFTLLTEQEKPNPKLKLKFILWFKPAKLEECLEKVLSNGEFQGLKDENFPQRSNCHVKLYHDAHHSPTFQPPFDPCGAPNNLWEDIYKAIEGAKHIVYIAAWSLKPKIVLVRDPHTKIQHARGMNLGDLLKKKADEGVAVRVMLWDDGTSLALVKNKGVMNTHDEDALTYFNHTKVICEKCPRLHHKFPTLFAHNQKTITVDIKVAKSVSDREIMSFVGGLDLCDGRYDTEQHSLFQTLIKESHCYDFYQPNIEGASLNKGGPRVPWHDAHACVTGEAAWDVLTNFEQRWAKQCDPSLLVPISTLVNLMPRRNSNTSIESNWKVQVHRSIDQASVGDICGNFTAERSIHEAYVEAIRHAERFIYIENQYFIGGCQWWKKDKDCGCTNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGVPESESVQDILHWTRETVTMMYRLIGEAIKQSGEIGHPRDYLNFFCLANREHKGKGEYLPLDFPHPETQYWHAQKSRRFMVYVHSKLMIVDDMYILLGSANMNQRSMDGKRDTEIAIGCFQSQDEVMKQMNLGDVHAYRMSLWYEHTNSFNELFLEPESLECVKRMCSIGDQMWETYSSEEIVDMEGVHLVTYPMRVTQEGYVKDLSNGVYFPDTNSLVKGKRSTLPTNVMAPSNDEIHEEILKVSNEEEDPIPRPRAKRNTDKPKHFENYVMPKCKKGGRE 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun1959g00003 807 Gene3D C2 domain 29 129 IPR035892 -
Vifaun1959g00003 807 SMART pld_4 296 333 IPR001736 GO:0003824
Vifaun1959g00003 807 SMART pld_4 604 631 IPR001736 GO:0003824
Vifaun1959g00003 807 PIRSF PLD_plant 5 757 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vifaun1959g00003 807 SUPERFAMILY Phospholipase D/nuclease 148 407 - -
Vifaun1959g00003 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Vifaun1959g00003 807 Pfam Phospholipase D C terminal 677 747 IPR024632 -
Vifaun1959g00003 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 125 IPR035892 -
Vifaun1959g00003 807 Gene3D Endonuclease Chain A 444 657 - -
Vifaun1959g00003 807 PANTHER PHOSPHOLIPASE D 7 742 IPR015679 -
Vifaun1959g00003 807 MobiDBLite consensus disorder prediction 771 807 - -
Vifaun1959g00003 807 SUPERFAMILY Phospholipase D/nuclease 424 688 - -
Vifaun1959g00003 807 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Vifaun1959g00003 807 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Vifaun1959g00003 807 Pfam C2 domain 37 103 IPR000008 -
Vifaun1959g00003 807 Gene3D Endonuclease Chain A 175 426 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun1959g00003 30 751 Phospholipase D Gene Family (Wang group) AT1G55180 59.673 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun1959g00003 K01115 - gmx:100812642 1232.24