Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun18628g00004 ATGTCCATAAAGAACACTGCAATTTTACAAAATCCAGAAGTGATGTTGCAAAAGAAAGCTATGGCTATTGAGAAGAAGATCAATGCATATATGCAACAGTTGAAAACAATGGAAAAGAAATTTGATCCATTACCTCATTTTACTTTGCATAGAGTGTTATCTCAAATTTCTCCACAATTTTATACTAAAGATGAGTTAACTCAAATTGAAAAAATCAATCACATTTTGAGTGAAGAAACAAATCTCTCTCTTATTTCACAAAGTAATGTGAAAAAAGTAGAAGTCAATGATGAAAAAAGTTGTTGTCCAAGTAATAAAGATATCATCTTTGATGAAGGTAGAAGAGTGAAACCAAAATCAGCAATTAGGAGGAAACCAATAATTCACAAAAAAGAAATTTTGTTGTCACCGCCACCAGAATTGCCTAGTCATGTTAATGACATGATCAAAGTGTTGAATGGTAGTGATATTAAATATATCATGTGTAAGGAATTGTTTAAGTCAGATCTCAACAATAATCTCAATCGTCTTTCAATGCCAATTACACAAATCAAATCTGATTTCCTCACAGAAATAGAAAAGGCAACCTTGGAAACAAGGGATCAAGAAGAAAAACCGATTGGTATAAAAGTGACTGTGTTAGATCCTTGTTTTAACGAATTCTCGTTGTTTTTGAAGAAGTGGAACATGAAGACTACTAGCATTTATATTCTTCATCAAGATTGGACACATGTTTTGTTGGAGAATAAATTTAAAGAAAATCAAAAACTTGACATTTGGTCATTTAGGGTTAATGAAAAGTTATACCTTTTACTCAATAGCAATGAGTCACAAGAAATTGAAGAAAGTAAAGAGGTGAAGAATTCAACTGTGGTTTCGAAAACGAAGAAGAATGAAGATGCTAAAGAGTGA 912 0.3147 MSIKNTAILQNPEVMLQKKAMAIEKKINAYMQQLKTMEKKFDPLPHFTLHRVLSQISPQFYTKDELTQIEKINHILSEETNLSLISQSNVKKVEVNDEKSCCPSNKDIIFDEGRRVKPKSAIRRKPIIHKKEILLSPPPELPSHVNDMIKVLNGSDIKYIMCKELFKSDLNNNLNRLSMPITQIKSDFLTEIEKATLETRDQEEKPIGIKVTVLDPCFNEFSLFLKKWNMKTTSIYILHQDWTHVLLENKFKENQKLDIWSFRVNEKLYLLLNSNESQEIEESKEVKNSTVVSKTKKNEDAKE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun18628g00004 303 Pfam B3 domain-containing protein At2g31720-like 141 246 IPR005508 GO:0003677
Vifaun18628g00004 303 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 57 274 IPR005508 GO:0003677
Vifaun18628g00004 303 MobiDBLite consensus disorder prediction 278 303 - -
Vifaun18628g00004 303 SUPERFAMILY DNA-binding pseudobarrel domain 159 276 IPR015300 -
Vifaun18628g00004 303 MobiDBLite consensus disorder prediction 277 303 - -
Vifaun18628g00004 303 Gene3D - 150 285 IPR015300 -
Vifaun18628g00004 303 Coils Coil 20 40 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun18628g00004 140 272 B3 DNA Binding Superfamily AT1G05930 25.185 8.98e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun18628g00004 - - psat:127101787 358.607