Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun18628g00002 ATGTTGCAAAAGAAAGCTATGGCTATTGAGAAGAAGATCAATGCATATATGCAACAGTTGAAAACAATGGAAAAGAAATTTGATCCATTACCTCATTTTACTTTGCATAGAGTGTTATCTCAAATTTCTCCACAATTTTATACTAAAGATGAGTTAACCCAAATTGAAAAAATCAATCACATTTTGAGTGAAGAAACAAATCTCTCTCTTATTTCACAAAGTAATGTGAAAAAAGTAGAAGTCAATGATGAAAAAAGTTGTTGTCCAAGTAATAAAGATATCATCTTTGATGAAGGTAGAAGAGTGAAACCAAAATCAGCAATTAGGAGGAAACCAATAATTCACAAAAAAGAAATTTTGTTGTCACCGCCACCAGAATTGCCTAGTCATGTTAATGACATGATCAAAGTGTTGAATGGTAGTGATATTAAATATATCATGTGTAAGGAATTGTTTAAGTCAGATCTCAACAATAATCTCAATCGTCTTTCAATGCCAATTACACAAATCAAATCTGATTTCCTCACAGAAATAGAAAAGGCAACCTTGGAAACAAGGGATCAAGAAGAAAAACCGATTGGTATAAAAGTGACTGTGTTAGATCCTTGTTTTAACGAATTCTCGTTGTTTTTGAAGAAGTGGAACATGAAGACTACTAGCATTTATATTCTTCATCAAGATTGGACACATGTTTTGTTGGAGAATAAATTTAAAGAAAATCAAAAACTTGACATTTGGTCATTTAGGGTTAATGAAAAGTTATACCTTTTACTCAATAGCAATGAGTCACAAGAAATTGAAGAAAGTAAAGAGCTGAAGAATTCAACTGTGGTTTCGAAAACGAAGAAGAATGAAGATGCTAAAGAGTGA 870 0.3149 MLQKKAMAIEKKINAYMQQLKTMEKKFDPLPHFTLHRVLSQISPQFYTKDELTQIEKINHILSEETNLSLISQSNVKKVEVNDEKSCCPSNKDIIFDEGRRVKPKSAIRRKPIIHKKEILLSPPPELPSHVNDMIKVLNGSDIKYIMCKELFKSDLNNNLNRLSMPITQIKSDFLTEIEKATLETRDQEEKPIGIKVTVLDPCFNEFSLFLKKWNMKTTSIYILHQDWTHVLLENKFKENQKLDIWSFRVNEKLYLLLNSNESQEIEESKELKNSTVVSKTKKNEDAKE 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun18628g00002 289 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 43 260 IPR005508 GO:0003677
Vifaun18628g00002 289 MobiDBLite consensus disorder prediction 264 289 - -
Vifaun18628g00002 289 SUPERFAMILY DNA-binding pseudobarrel domain 145 262 IPR015300 -
Vifaun18628g00002 289 Gene3D - 136 273 IPR015300 -
Vifaun18628g00002 289 MobiDBLite consensus disorder prediction 263 289 - -
Vifaun18628g00002 289 Coils Coil 6 26 - -
Vifaun18628g00002 289 Pfam B3 domain-containing protein At2g31720-like 127 232 IPR005508 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun18628g00002 126 258 B3 DNA Binding Superfamily AT1G05930 25.185 8.28e-08 50.8