Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun1786g00001 ATGAGAAGTGCAAATAGTAAAATTAGAATGAAGCCATATAAAAATACTAGTCTTCGCCGCCGGTTGAACGAGATTTACAAAGGGAAAATGAGTCGGGCTAGTGCAGCTGGTGCCAAGGGAAAGAAGAAGGGTGCAACCTTCACCATTGACTGTGCTAAGCCAGTTGAAGACAAGATCATGGACATTGCTTCCCTTGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGGTGGCAAAGCCGGTGCTCTTGGTGATTCTGTTACTGTTTCCAGGGAGAAATCAAAGATCACTGTTACCTCTGACAGCAACTTCTCCAAGCGTTACTTGAAGTATTTGACAAAGAAATACTTGAAGAAACATAACGTAAGAGATTGGCTAAGGGTCATTGCTTCAAACAAAGATAGGAATATCTATGAGTTGAGGTATTTCAACATTGCAGAAAACGAAGGAGAGGAAGAGGATTAA 462 0.4134 MRSANSKIRMKPYKNTSLRRRLNEIYKGKMSRASAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun1786g00001 153 PANTHER 60S RIBOSOMAL PROTEIN L22 15 153 IPR002671 GO:0003735|GO:0005840|GO:0006412
Vifaun1786g00001 153 FunFam 60S ribosomal protein L22-2 34 153 - -
Vifaun1786g00001 153 Gene3D - 34 153 IPR038526 -
Vifaun1786g00001 153 Pfam Ribosomal L22e protein family 43 151 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun1786g00001 30 153 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.903 1.81e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun1786g00001 K02891 - csav:115723248 216.083