Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun1630g00002 ATGGTAGCTAAGAAAGAGGACATTCATAAAAATCGTGTGGCTGCTGAGGAATTGAAAACCAAACACCTTAATCAGAAAATGCTTTTTGACCAACAGCAAAGAGACATTCAAGAACTAAAGCTTACTCTTCACACCACAAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCGTGACGAATTTTCCAATCTTGGAATGCATATTCATGGATTAGCTAAGGCTGCTTCTGGATATCATAGAGTTCTGGAAGAAAATCGCAAACTATACAATGAAGTCCAAGATCTAAAAGGAAGTATAAGGGTATATTGTCGAATAAGACCCTTCTTTCCTGGACAACCTAACCAATTGAGCGCAGTAGAAAATATAGAAGATGGAACAATCACAGTTAGTATTCCTTCGAGGAATGGGAAGGGACAAAGATCCTTCAACTTTAACAAAGTCTTTGGACCATCTACCACCCAAGCGGAGGTATTCCTGGATATGCAACCACTTATTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGACAAACAGGATCAGGAAAAACTTACACAATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGAAATTCATAGCAGCTCTCACAAAGGGCTCAGTGTGCCAGATTCCAGCCTTGTCCCAGTGTCATCAACTATTGATGTTATTAAACTAATGAACCTTGGGCACAGGAACCGTGCTGTTGGAGCAACAACCCTTAACGACCGCAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGGCATCCGGAGCAACCATCCGCGGATGCATGCATTTGGTTGACTTAACAGGAAGTGAGAGGGTGGATAAATCAGAGGCTACTGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCCTTATCAGCTTTGGGCGATGTCATACGACAATCCATAATACGGAAACCAGGAAAAGAAAAAGAGATTAACTAG 987 0.4043 MVAKKEDIHKNRVAAEELKTKHLNQKMLFDQQQRDIQELKLTLHTTKAGMQFMQMKFRDEFSNLGMHIHGLAKAASGYHRVLEENRKLYNEVQDLKGSIRVYCRIRPFFPGQPNQLSAVENIEDGTITVSIPSRNGKGQRSFNFNKVFGPSTTQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQEIHSSSHKGLSVPDSSLVPVSSTIDVIKLMNLGHRNRAVGATTLNDRSSRSHSCLTVHVQGRDLASGATIRGCMHLVDLTGSERVDKSEATGDRLKEAQHINKSLSALGDVIRQSIIRKPGKEKEIN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun1630g00002 328 Gene3D Kinesin motor domain 41 197 IPR036961 -
Vifaun1630g00002 328 ProSiteProfiles Kinesin motor domain profile. 98 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun1630g00002 328 PANTHER KINESIN-LIKE PROTEIN KLP-3 17 200 IPR027640 GO:0003777|GO:0007018
Vifaun1630g00002 328 Gene3D Kinesin motor domain 198 326 IPR036961 -
Vifaun1630g00002 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 315 IPR027417 -
Vifaun1630g00002 328 Pfam Microtubule binding 84 205 IPR031852 GO:0008017
Vifaun1630g00002 328 PRINTS Kinesin heavy chain signature 171 192 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun1630g00002 328 PRINTS Kinesin heavy chain signature 243 260 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun1630g00002 328 PRINTS Kinesin heavy chain signature 274 292 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun1630g00002 328 SMART kinesin_4 96 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun1630g00002 86 313 Calmodulin-binding Proteins AT5G65930 35.273 1.36e-45 164