Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun15681g00001 ATGACAGAGAGAAATCCAATAGCAGCAAATTCATCATCTCCTGACAGTGATTTTAGCAGCCAACAATGGTCTTTTGAACTCTCTGACTACATGAGTTTTGCAGATATTGAATTGCAACAAGCTGATCCTACTGCTAATAATCAGTCTTTTGTTTATCAAGCCAATGAAATAGCAGGTGGCAGCAGCAACATTGAGGGGTCTTCTAGTTATACCAGGGATACAAATACTACAATGAGTGGAACAGCCCTAACCCAAGATGGAGAAAGTATGGAAAGAAAATGGTTAAAAACAGCCCTAATCCAAGGAATTATTATAGGTGTTCAGTGGAGGGATGTCCCTGTAAAAAAGAGAGTTGAGAAAGATAAGGATGATTCAAGATATGTGATAACAACCTATGAAGGCTTGCACACACACTCAACTTCTTCATAG 429 0.3893 MTERNPIAANSSSPDSDFSSQQWSFELSDYMSFADIELQQADPTANNQSFVYQANEIAGGSSNIEGSSSYTRDTNTTMSGTALTQDGESMERKWLKTALIQGIIIGVQWRDVPVKKRVEKDKDDSRYVITTYEGLHTHSTSS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun15681g00001 142 Gene3D WRKY domain 91 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifaun15681g00001 142 MobiDBLite consensus disorder prediction 61 87 - -
Vifaun15681g00001 142 SUPERFAMILY WRKY DNA-binding domain 110 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifaun15681g00001 142 MobiDBLite consensus disorder prediction 1 20 - -
Vifaun15681g00001 142 ProSiteProfiles WRKY domain profile. 87 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifaun15681g00001 142 MobiDBLite consensus disorder prediction 61 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun15681g00001 47 140 WRKY Transcription Factor Family AT5G26170 32.308 4.92e-09 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifaun15681g00001 None None None