Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun12921g00001 ATGGATTCATTCGAACAATCACACACTTTGCAAGAATCCAATCACAAAAAACGCCGCAAAATCGGCGACACCACCGCCGATCAAAACTCCCTCACTCTCGTGCGGTGGAGATCTGAATCCGACCAGAACAACTACTCCAAAAAACTAATCGAAGCTCTCAGCCGGATCAACTCTCCAACAACCACCACCAAACCTAGAGCCGCTTCTCAAGTCCGCGAAACCGCCGATCGCGTCCTCGCCAAATCCGCCAAAGGAAGAACACGCTGGAGCCGCGCGATTCTCGGAAAATGGAAGAAACTTCATAGACACCACAGAAAAGTCAAGAAAGCCGCAACCGGATTGAACAGAACCGGAATCGTAAGAGAGAGGTTACCGGCTGTGCAGAAGAAAACACGCGTGCTCGGCCGGTTGGTTCCCGGCTGCCGGAAAGTACCGTTACCAAATCTTCTAGAAGAAGCTACTGATTATATTTCTGCCTTGGAGATGCAAGTGCGTGCTATGACTGCTCTCGCTGAGCTTCTCGCCGGTCGAACATCGGCTGGACTCGCCGGTCATGTGCTGAGTTGA 567 0.5168 MDSFEQSHTLQESNHKKRRKIGDTTADQNSLTLVRWRSESDQNNYSKKLIEALSRINSPTTTTKPRAASQVRETADRVLAKSAKGRTRWSRAILGKWKKLHRHHRKVKKAATGLNRTGIVRERLPAVQKKTRVLGRLVPGCRKVPLPNLLEEATDYISALEMQVRAMTALAELLAGRTSAGLAGHVLS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun12921g00001 188 CDD bHLH_AtIBH1_like 121 171 IPR044549 GO:0006355
Vifaun12921g00001 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 177 IPR036638 GO:0046983
Vifaun12921g00001 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 111 160 IPR011598 GO:0046983
Vifaun12921g00001 188 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 38 174 IPR044660 GO:0006355
Vifaun12921g00001 188 MobiDBLite consensus disorder prediction 9 24 - -
Vifaun12921g00001 188 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun12921g00001 4 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.809 6.41e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun12921g00001 - - gmx:100783462 217.624