Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun10792g00002 ATGCAGTCCCTGCAATCATTTGCTTTCATTTTAATATTTGTAATTCTTGCATTTGATGTTTGTGAATCTGATGATTGTAGCAATCCCTTGAAGAGCATTAGTGTTAGTCAATCAGGCAAAGCAAATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCCTGCAGGAAACTCTCAATGGATTCATATCCAAATATCCTCTGGTGTTTACAAAGAGCAAGTATTAATTCCAAAAAACAAACCATGCATTTATCTTGAAGGAGCTGGTAGCAAGTCCACAAGCAAAGCAAATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCCTGCAGGAAACTCTCAATGGATTCATATCCAAATATCCTCTGGTGTTTACAAAGAGCAAGTATTAATTCCAAAAAACAAACCATGCATTTATCTTGAAGGAGCTGGTAGCAAGTCCACAAGTATAGAATGGGGCTCTCATGAAAATGCTACTTTCGATATAAAAGCAAGCAATACTGCTGCAAAGGGAATAACTTTTACGAATACATTGAACAGGCCAGTATTATTAGACGTGATTAACGTTGTACAAGCCAAAGCTGCGAAAATCCATGCAGATAAATGTGCTTTCTATAGCTGTTCTTTTCTTGGGGTGCAAAAATATGTTTTGTGTGAATCTTGCAGGCTGCTAGGTATGCGTAGCTTGGACCAAATGGTAGTCAAGGAAGGATCATGGTCCTAG 723 0.3762 MQSLQSFAFILIFVILAFDVCESDDCSNPLKSISVSQSGKANFKTIQSAIDSVPAGNSQWIHIQISSGVYKEQVLIPKNKPCIYLEGAGSKSTSKANFKTIQSAIDSVPAGNSQWIHIQISSGVYKEQVLIPKNKPCIYLEGAGSKSTSIEWGSHENATFDIKASNTAAKGITFTNTLNRPVLLDVINVVQAKAAKIHADKCAFYSCSFLGVQKYVLCESCRLLGMRSLDQMVVKEGSWS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun10792g00002 240 SUPERFAMILY Pectin lyase-like 93 220 IPR011050 -
Vifaun10792g00002 240 Gene3D - 94 229 IPR012334 -
Vifaun10792g00002 240 SUPERFAMILY Pectin lyase-like 33 93 IPR011050 -
Vifaun10792g00002 240 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 93 - -
Vifaun10792g00002 240 Pfam Pectinesterase 33 93 IPR000070 GO:0030599|GO:0042545
Vifaun10792g00002 240 Pfam Pectinesterase 95 220 IPR000070 GO:0030599|GO:0042545
Vifaun10792g00002 240 Gene3D - 22 93 IPR012334 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun10792g00002 7 93 Carbohydrate Esterase AT2G19150 43.182 3.39e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun10792g00002 - - mtr:25501033 201.445