Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun10398g00001 ATGTTCACTTCAAGGAAGAAAATCAGCAAAGATAAGGGTGCTGAGCCAACTGAATTTGAAGAATCAGTTGGACAGGCGTTGTTCGATTTAGAGAACACCAACCACGAGCTTAAAAGTGAGCTAAAGGATTTATACATCAATTCAGCCGTTCAAATTGATGTGTCTGGCAATCGCAAGGCTGTGCTTATTAATGTCCCCTACAGACTCAGGAAAGGTTTCCGCAAGATTCATGTCAGGCTTGTTCGGGAGCTTGAGAAGAAATTCAGCGGCAAGGATGTAATCCTGATTGCCACAAGGAGGATTCTGAGATTGTTGGAAAGCGCATTAGGTACCCGCGTTGATGGGTCAAAGATTATGAAGGTGTTTTTGGACCCAAAGGAAAGAAACAACACTGAATACAAGTTGGAGACCTTTGCTGCAGTTTACAGGAAACTTTCAGGCAAAGATGTTGTTTTTGAGTATCCTGTTACTGAAGCTTAG 480 0.425 MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQIDVSGNRKAVLINVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRILRLLESALGTRVDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPVTEA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun10398g00001 159 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vifaun10398g00001 159 Pfam Ribosomal protein S7e 111 154 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vifaun10398g00001 159 Pfam Ribosomal protein S7e 7 103 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vifaun10398g00001 159 PANTHER 40S RIBOSOMAL PROTEIN S7 110 158 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vifaun10398g00001 159 Coils Coil 27 47 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun10398g00001 1 159 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 62.304 2.27e-80 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun10398g00001 K02993 - gmx:100499757 256.144