Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun1014g00001 ATGTTTTCTTCAACATCCAGACCCCAATGGATCTACGACGTGTTCATAAATTTCAGGGGAAAAGACACTCGCAGCAAATTCGTCTCTCATCTGTATGCTGCATTCACAAATGCTGGAATCAACACTTTTCTTGACGACGAGAGTCTTGAAAAGGGAAAGGAACTTGGACCAGAGTTACTGCGAGCAATTGATGGTTCACAGATATTCATAGTTGTTTTCTCCGAAAACTATGTTCACTCTAGTTGGTGTCTTGATGAACTCCAACAAATCATCAAATTCAACAAAGATAAGGATCGACTTATTATGCCTTTATTTCACGGTGGTATTACCCCTTCGTATATACGTGAATATGCTAAGCACACTTTTGGAGAAGCTCCCACTAGAACTAATCAAAGGACTGATGTGAAGGAAAATCCACGAAAGATAGCACTCATCGCTGCTTCCAATTTGGCTGGTTGGGATATGAATAATTACAGTAACGAAAGCAGTGTTGTGAAGGAAGTTGTTGCCCAAGTTTTGAAAAAACTAGACAAAAAATGCTTACCTATCCCAGATTTTCCAGTTGGACTAGAATCCCGTGCCGAATTGTTGATTCGGTTTTTACGACAGAATACAAGAGAAGTTTGTTTAGTAGGGATTTGGGGAATGGGGGGAATTGGCAAAAGCACCATTGCCAAAGCCATCTACAATAATCTTTGTTATGAATTTGAAGATCGAAGCTTCCTTGCTAATATTAGAGAAGTTTGGGAGAAAGATAGAGGCCAAAAGGACTTACAAGAACAACTTCTTTCAGATATCCTAACAAGAAAAATAAAGGTGCGTAATGTTGAGTTGGGAAAAGCTATGATCAATGATCGACTCTCCACAAAACGGGCACTTGTTGTACTTGATGATGTCAGTACGCTGGAGCAACTAAAGGCACTATGTGGGAATCGAAATGGGATTGGTTCAGGAAGTATAATAATCATCACAACAAGAGATGTGCGTCTACTTGATATCCTTGGAGTTGACTTTATTTATGAAGCGGAGGAATTGAATGCGATCGAGTCCCTTGAGCTTTTCAGTTGGCATGCGTTTAGGGAGGGGCATCCAACTGAAGGTTTCCTTAGCCTCTCAGGAGATGTAGTTTCCTACTGTGGTGGACTGCCACTAGCTCTTGAAGTCCTTGGATCTTACTTGTGCAAGAGGAAAAGACAAGACTGGCGGAGTGTATTATCAAAGCTAGAAAAGATACCCAATGATCAAATACATGAGAAACTAAAAATTAGCTTTGATGGTTTAGAGGATCGTATGGAAAAGGATATATTTCTTGATGTGTGTTGTTTCTTTATCGTGCTGATAGAAAGAAGCCTCATAAAAGTTGAAGCGAATAATAAGCTTGGAATGCATGCTTTGCTACGAGACATGGGAAGAGAAATTGTTCGTGAAAGTTCACCTGAGGAGCCTCAGAAACGTAGTCGATTGTGGTGTCATGAGGATGTAGTTAATGTATTAACTGACCACACTGGAACAGATGTCATTGAAGGGTTGGTTATGAAGTTGCAAGGGACCAATGGTGTTTGCTTCGATACTATTGCTTTTGAAGAAATGAAGAGATTGAGATTGTTGCAACTTGATCATGTACAATTCAGAGGAGATTATGGGTGTTTTCCAAGGAACCTGAAATGGCTTTCTTGGCAAGGATTTCCTTTAAAATACACGCCAGAAAACTTTTATCAGAACGATCTAGTTGCTATGGACTTAAAACACAGTAATCTTACACAGGTTTGGAAGAAGCCTCAGTTGATGCAGAAGCTAAAAATTATCAATCTCAGTCATTCCAAGTGCTTAAAAAGCACCCCTGACTTTTCAAAATTACCGAACCTAGAAAAACTCGTTATGAAGGATTGTCAAAGTTTGTCCGAGGTGCACTCATCCATTGGAGATCTCAAGAATCTTCTTTTGATAAATTTGAAGGATTGTACAAACCTTAGCAATCTCCCAAGAGAGATATATCAATTGACATCAGTGAAAACTCTCATCCTGTCCGGCTGTTCAAAGATTGACAAGTTGGAAGAAGACATGGGGCAGATGGAGTCCTTGACAACACTGATTGCAAAAGATACATCTGTAAAAGAAGTTCCCCATTCAATACTAAGATTAAATATTGGATATATATCCCTATGTGGATATGAAGGATTACCGCATGATGTTTTTCCATCTCTCATTAGGTCTTGGATGTCACCAACAATGAATTCCTTATCACACATTCTTCCGTTCGGTGGTCTGACTGAACTGGGAACATCACATGCATCACAAGTTTCGGATCTTTCCTTGAGATCTGTTTTGATTGGAATTGGAAGTTGCCACATTGTCATCGATACTCTTGAGAAGAGCTTATCACAGAGATTGGCAACCAATTGTAGCAATTATTTCTTTCCGGAAGACAATTATCCTTCTTGGTTAGTCTATAGAGGTGAAGGACCTTCGGTAAAATTTCAAGTTCCCGAGGATACTAATTCTGTAATGAAGGGCATAACTCTATGTGTTCTTCATTCATCAAGACCTGAAAACCTGACATGTGAATGTTTCACTAGTGTCTTGATTATTAATTACACAAAATTCACTTTCCATATTTACAAAGGAGACACAGTAATATCGTTTAATGATGAAGATTGGCTAAGCGTGAAATCAAATTTAGGAGTTGGTGACAATGTGGAGATTTTTGTAACTATTGGGCACGAATTGATTGTTAAGGAGACGGCTGTCTATCTAATATATGAAATGGAAGTTGATCCAACAATTCAACTGGAAGCACAACCATCACCTGATGTGAAAACAGAACCATCACTTTTTGTCAAGAATGAACCATTACCGAAGACAAAAAGAATTTCTTTTGTAAGAATCGCAAAAAGAGTGAGAAAATGTTTATGCTTGAACGAGAATTGA 2928 0.388 MFSSTSRPQWIYDVFINFRGKDTRSKFVSHLYAAFTNAGINTFLDDESLEKGKELGPELLRAIDGSQIFIVVFSENYVHSSWCLDELQQIIKFNKDKDRLIMPLFHGGITPSYIREYAKHTFGEAPTRTNQRTDVKENPRKIALIAASNLAGWDMNNYSNESSVVKEVVAQVLKKLDKKCLPIPDFPVGLESRAELLIRFLRQNTREVCLVGIWGMGGIGKSTIAKAIYNNLCYEFEDRSFLANIREVWEKDRGQKDLQEQLLSDILTRKIKVRNVELGKAMINDRLSTKRALVVLDDVSTLEQLKALCGNRNGIGSGSIIIITTRDVRLLDILGVDFIYEAEELNAIESLELFSWHAFREGHPTEGFLSLSGDVVSYCGGLPLALEVLGSYLCKRKRQDWRSVLSKLEKIPNDQIHEKLKISFDGLEDRMEKDIFLDVCCFFIVLIERSLIKVEANNKLGMHALLRDMGREIVRESSPEEPQKRSRLWCHEDVVNVLTDHTGTDVIEGLVMKLQGTNGVCFDTIAFEEMKRLRLLQLDHVQFRGDYGCFPRNLKWLSWQGFPLKYTPENFYQNDLVAMDLKHSNLTQVWKKPQLMQKLKIINLSHSKCLKSTPDFSKLPNLEKLVMKDCQSLSEVHSSIGDLKNLLLINLKDCTNLSNLPREIYQLTSVKTLILSGCSKIDKLEEDMGQMESLTTLIAKDTSVKEVPHSILRLNIGYISLCGYEGLPHDVFPSLIRSWMSPTMNSLSHILPFGGLTELGTSHASQVSDLSLRSVLIGIGSCHIVIDTLEKSLSQRLATNCSNYFFPEDNYPSWLVYRGEGPSVKFQVPEDTNSVMKGITLCVLHSSRPENLTCECFTSVLIINYTKFTFHIYKGDTVISFNDEDWLSVKSNLGVGDNVEIFVTIGHELIVKETAVYLIYEMEVDPTIQLEAQPSPDVKTEPSLFVKNEPLPKTKRISFVRIAKRVRKCLCLNEN 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun1014g00001 975 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 118 IPR035897 -
Vifaun1014g00001 975 Pfam NB-ARC domain 196 413 IPR002182 GO:0043531
Vifaun1014g00001 975 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Vifaun1014g00001 975 Gene3D - 344 428 IPR042197 -
Vifaun1014g00001 975 SUPERFAMILY L domain-like 475 761 - -
Vifaun1014g00001 975 Gene3D Ribonuclease Inhibitor 511 708 IPR032675 -
Vifaun1014g00001 975 PRINTS Disease resistance protein signature 210 225 - -
Vifaun1014g00001 975 PRINTS Disease resistance protein signature 665 681 - -
Vifaun1014g00001 975 PRINTS Disease resistance protein signature 379 393 - -
Vifaun1014g00001 975 PRINTS Disease resistance protein signature 286 300 - -
Vifaun1014g00001 975 Pfam TIR domain 12 178 IPR000157 GO:0007165
Vifaun1014g00001 975 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 703 IPR044974 GO:0006952
Vifaun1014g00001 975 SMART till_3 11 150 IPR000157 GO:0007165
Vifaun1014g00001 975 Gene3D - 9 173 IPR035897 -
Vifaun1014g00001 975 Gene3D - 174 337 IPR027417 -
Vifaun1014g00001 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 438 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun1014g00001 12 714 WRKY Transcription Factor Family AT4G12020 28.610 1.27e-68 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun1014g00001 - - mtr:11423959 1314.29