Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04196 ATGGCTTCTCCACCTCATCACTCTACTATGAATAATAAAACATGGACGCAAACAATTCTCCTGTCTTTTCAAATTGTTGGAGTTGTTTATGGTCAACTCAGTACTGCCCCCTTATATGTCTTTAGTACAATGCGTTCCGAGGATCTTGATTCTCAGGAAGTTGTTTATGAACTCTTCTCTTTCATTTTTTGGACTCTCACTACTATTTCTTTCATCAAGTATGCCCTCATAGTCCTCAAAGCTGATGATAATCAAGAGGGTGGTACTTTTGCTTTATACTCACTCTTGTGTAGAAATGCAAAAGTTGGTCTACTCCCTTGTGATAGAACTGCCAATCAGGTCATGCTTTTGGAGGACACGACAACTCCTCCTTCTAAGATCAACTTTGACTCCAGAGCTAGAAGGGCCATTGAGAAACACAAGTTCTGTCACTATTTGATTTTGTTCTTGGCCCTTTTTGGTTCCTGTATGACTATTGGAGCCGCGGTCCTCACTCCAGCACTATCTGTCTTATCAGCTTCATATGGAGTTGAGAGATCCTTGTCAGAATTATCACACCTATTTACCTCGTCACAACATACGCGGAATTCTGTCTCAAACGCTCTACAAAAATATGTACCTGTTCCCGCTGCGTGTGTTATATTGATTGGCCTGTTCGTGCTGCAGCCCTGTGGTACTCGAAAAATCGGGTTCATGTTTGCTCCGATTATTGCTGTTTGGCTTTTCTTTGTTGGTGTCGTGGGAGTTTATAATATTATTCGCTGGGACGTAGAAATTCTCTATAAAATATCACCACTATACCTGATCAAATTCATGAGGAATCTTGATGTAAGCAGATGGAGGCTATTAGGGAGCGCCATTTTATGTGCAGCAGGATCAGAGGCAATGTTTGCAGGGTTAGGCCATTTTTCCAAGAAATCAATCAAGATTACGTTTATTTGCTTGATCTATCCGCTTCTTGTGATATGTTATGCGGGTCAGGCTGCGTTTATCTCTAAAAACTTGAAGACTGATAATTTTAATCATCTTAGTCAATCTGTGCCAAGTCATTCCAAACATTTATTCATAGTAGTATCCCTACTATCTTCCGCTGTCGGAAGCCAAGCAACTATAACAGCATGCTTCTCTATTATTAACCAGTGTCTGGCTCTAAATTGCTTTCCCAGAGTGAAAGTGGTTCACACATCAAAAACAATACACGGCCAGGTTTACATCCCTGATGTCAATTGGTTATTGATGATTTTCAGTCTAACTGTCACAATTGGTTTTAGAGACATGGTGAAAATCGGCAACGCAACAAGTTTGGCTATAGTATCTGGAATGCTGGTGACAACTAGTCTCATGTCACTAGTCATTGCTTTGTATTGGGAGAAGAATTTGTTGATATCTGCATGCTTTCTATTATGTTTTGGCGTTGTCGAGGTTGCATATCTTTCAGCATGTATGCTGCAATTTCACAGGGGAGCTTGGTATCTAGTTGTTCTTTTGATAGTGTCGATGACAGTCATGCTTTCATGGCATTATGGAACGGTGAAGAAGTACGAGTTTGATTTACAAAACAAGGTATCCACCGAATGGCTGATAGACGTTAGTCCGGGTCTTGGGATTTCAAGGGTAGCTGGAATTGGCTTCATTTACACAGACATAGTAACAGGGATCCCGGCTTTCTTTTCACATTTTATTACTAATCTTCCTGCATTTCATCAAGTGTTGATCATGGTGTCCTTCAAGTCTATGGCAGTGCCTCATGTTCCCGAAAGTGAAAGGGACACGAATGATTTTGAGGAGAAGATTATTCGCGCTATTGGAGAATTCATTTCCATCGAACATGTTACTGACATTGAATCAATGGTTTCGCCAGACGAAAGAATGATTATAGTAGGAAATTCATCAGACGGAAATGCATTAGTCCCTCTGATGAATGAATCGAGCAAGCAAGTGAGTACTATCAATGAAGCTCAGGTAAGTCCAATAGCAATGGATGATAACGATCATACGCTTTTGGCGAGTAGTAGTAAGTCTTGCAAGAAAAGAAAAAAAGTTAGGTTCATGTTGCCACCTGCTAGTAGTGTTCCTAAAATGGATGAATCTGTTAAGAAGGAGCTACTGGAACTGATTGATGCAAGGGAGAGTGGAAGTGCTTATTTCTTAGGACAGTCACATTTAGTGGTGCGTGGTGGATCAAACTATCTCAAGATATTCTTAATAATGGTTTATCGTTTCTTTGAAAAAAATGGGAGGGAACCACCTGTTGCTCTAAAAATTCCTCATGCTGCTCTTGTAGAAGTTGGTATGATGTGTAGTATATGA 2310 0.403 MASPPHHSTMNNKTWTQTILLSFQIVGVVYGQLSTAPLYVFSTMRSEDLDSQEVVYELFSFIFWTLTTISFIKYALIVLKADDNQEGGTFALYSLLCRNAKVGLLPCDRTANQVMLLEDTTTPPSKINFDSRARRAIEKHKFCHYLILFLALFGSCMTIGAAVLTPALSVLSASYGVERSLSELSHLFTSSQHTRNSVSNALQKYVPVPAACVILIGLFVLQPCGTRKIGFMFAPIIAVWLFFVGVVGVYNIIRWDVEILYKISPLYLIKFMRNLDVSRWRLLGSAILCAAGSEAMFAGLGHFSKKSIKITFICLIYPLLVICYAGQAAFISKNLKTDNFNHLSQSVPSHSKHLFIVVSLLSSAVGSQATITACFSIINQCLALNCFPRVKVVHTSKTIHGQVYIPDVNWLLMIFSLTVTIGFRDMVKIGNATSLAIVSGMLVTTSLMSLVIALYWEKNLLISACFLLCFGVVEVAYLSACMLQFHRGAWYLVVLLIVSMTVMLSWHYGTVKKYEFDLQNKVSTEWLIDVSPGLGISRVAGIGFIYTDIVTGIPAFFSHFITNLPAFHQVLIMVSFKSMAVPHVPESERDTNDFEEKIIRAIGEFISIEHVTDIESMVSPDERMIIVGNSSDGNALVPLMNESSKQVSTINEAQVSPIAMDDNDHTLLASSSKSCKKRKKVRFMLPPASSVPKMDESVKKELLELIDARESGSAYFLGQSHLVVRGGSNYLKIFLIMVYRFFEKNGREPPVALKIPHAALVEVGMMCSI 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04196 769 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 9 767 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g04196 769 Pfam K+ potassium transporter 23 590 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g04196 769 NCBIfam potassium uptake protein 21 769 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04196 Vifa-Chr6 1378370565 1378373626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g04196 7 769 Inorganic Solute Cotransporters AT1G70300 41.843 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04196 K03549 K12236 gmx:100801073 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g04196 6 1378370565 1378373626 Vifa6g04196 6 1378370565 1378373626 ECH