Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04156 ATGAGAGTTAAAAGTATAATGATTTCTGAACTTTATATAATGCAGGCTGGTTTTACTCTGAGTCCAACTCTCTTTGGAAATTTCTATTGGGTATTTAACTTGTTTTACGGTCAACATGGAATCCTAGCCGTTGAAACCTTTGCAAACTTGGGAATAATGTACTATGTGTTCCTAAGTGGATTAGAAATGAATTCAGACACCATCTTAAGATTAAGGAAGAAAGGTACAAGCATAGCGATTGCTGGCATTGTGACACCAATGTTATTTGGTGTTGGATTTCTAGCTATACAAAAAAAGCTACTAGATAAAAATGATGCTTTCTCACAAACACCAAAATAA 339 0.3422 MRVKSIMISELYIMQAGFTLSPTLFGNFYWVFNLFYGQHGILAVETFANLGIMYYVFLSGLEMNSDTILRLRKKGTSIAIAGIVTPMLFGVGFLAIQKKLLDKNDAFSQTPK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04156 112 PANTHER CATION/H + ANTIPORTER 14 99 - -
Vifa6g04156 112 Gene3D - 7 107 IPR038770 -
Vifa6g04156 112 Pfam Sodium/hydrogen exchanger family 16 95 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04156 Vifa-Chr6 1368526398 1368526736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g04156 7 93 Antiporter Super Family AT2G13620 33.333 3.40e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04156 - K26731 psat:127095231 174.866