Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g04047 ATGGCTACTGCTTGTGCTTTGTTCAATGCTGTTGGAGGAGGAAACACTACTACTGATGAAACCAACAACAATAGTACCTCTAACTCAATTTCCAACACTGTTTCTGTTCCCACTGCTTTCTATTTATCACCTTCTCATTTCACAAACTCACCTATCTGTTATGGTGTTCCGGATAATCCTAACTTCCATTCATCTTTGTCTGTTATGCCTCTTAAGTCTGATGGCTCTCTTTGTATCATGGAAGCTCTTGGTAGATCACGATCACAAGTGATGGTGTCATCTTCATCTCCTAAACTTGAAGACTTTCTAGGTGGTGCAACAATGGGGACTCATGATGAATATGGTAGCCATGAAAGAGATGCAGCGATGGCTTTAAGCTTAAACAACATTTACTACAATGACCAACAAAATGCAGATCCTCATCAACAACCAACACACCACCAACTTACCTTCCGCGACGCACACCACCACCAATAA 477 0.4151 MATACALFNAVGGGNTTTDETNNNSTSNSISNTVSVPTAFYLSPSHFTNSPICYGVPDNPNFHSSLSVMPLKSDGSLCIMEALGRSRSQVMVSSSSPKLEDFLGGATMGTHDEYGSHERDAAMALSLNNIYYNDQQNADPHQQPTHHQLTFRDAHHHQ 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g04047 158 MobiDBLite consensus disorder prediction 134 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g04047 Vifa-Chr6 1335104992 1335105785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g04047 48 133 AP2-EREBP Transcription Factor Family AT4G37750 48.837 1.45e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g04047 K09285 - gmx:100798179 142.124