Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03998 ATGAGAACCCAACGCCCTCACCATCTCTTTCTATTATCCATCATCTTCTTTGCATTTACATTCTCATATCTCCAATCAGCAATCGCCACCGGAGAACAACCTCCGACCACCGGCAACGATGGCGACACCGAATTCATCCGTTCAAGCTGCAACACAACACTCTACCCAGACATATGCTACACTTCCCTCTCTCGTTACGCTAATGCAGTTCAACAGAATCCAGGCCAACTCGCTCGTATCGCCATCGCCGTAAGCTTCTCCAAAGTCCACCGCACCGCCTCCTACCTCTACAACCTCACTCGCGTCGCCGATTACGGCGGAAACTCTCGCGCCTCCCTCGCTCTCCACGACTGCTTCTCCAACCTCAACGACGCGGTGGATGAAATCCGCGGCTCTATTAAACAGATGCGCCAGATAGGATCCGCCGGAGCCAGCGCCGATTCGTTTCTTTTTCAGATGAGTAACGTCCAGACGTGGATGAGCGCGGCGCTTACCGATGAAGAAACGTGTACTGACGGATTTCAAGATGTGGAGAATTGTCCGATGAAAACGGACGTTAACGATCGTGTGACGAAGGTGAAGAAGTTCACGAGCAATGCTTTGGCGTTGGTTAACGGTTACGCCAGTAAAGGAATGCCGTGA 642 0.5202 MRTQRPHHLFLLSIIFFAFTFSYLQSAIATGEQPPTTGNDGDTEFIRSSCNTTLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLYNLTRVADYGGNSRASLALHDCFSNLNDAVDEIRGSIKQMRQIGSAGASADSFLFQMSNVQTWMSAALTDEETCTDGFQDVENCPMKTDVNDRVTKVKKFTSNALALVNGYASKGMP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03998 213 SMART PMEI_2 41 203 IPR006501 GO:0004857
Vifa6g03998 213 NCBIfam pectinesterase inhibitor domain 12 207 IPR006501 GO:0004857
Vifa6g03998 213 Pfam Plant invertase/pectin methylesterase inhibitor 45 203 IPR006501 GO:0004857
Vifa6g03998 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 203 - -
Vifa6g03998 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 205 IPR035513 -
Vifa6g03998 213 FunFam Pectin methylesterase inhibitor 1 41 207 - -
Vifa6g03998 213 CDD PMEI-like_3 48 209 - -
Vifa6g03998 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 207 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03998 Vifa-Chr6 1318801760 1318802401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03998 2 206 Carbohydrate Esterase AT5G53370 24.171 1.77e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03998 - - cam:101503417 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03998 6 1318801760 1318802401 Vifa6g03998 6 1318801760 1318802401 ECH