Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03987 ATGTTGGCACAAACATGGTACTTTCCTCGAACACCTTGTCGACATTTTCCGAATCCACCACCTCTACACCCTCATTTGCAGTCTCCTACTTCATCAAAAATCTCAAATTCTCATCAGAATCCGCTCTCAAAGCCTCCAAACTCGTCCATTTCAAAACCTCCAAAAAAACCCGATTCAGTTCTCAACTTCTTCAGAACCCACGGTTTCACCGATTCAGATATACACAAAATCATCCAAAGAGAACCCTGGCTCCTTTCCTGCGACACCCAGAAAAGGGTTCTCCCAAAGTTTCAATTTTTACTCTCCATCTCTCTCCGTAACGTGTTTCCTCTGTTCTCTGCAAACTTTCACAGAAATGTCGACGATAGTACGCAGAGGTATCCATTGCTTCCAGAGACTGAATTCAGCGAATGTATCAGCTGCTTTGCTAGAGAAAGGGCAAAATCGTGTAATCGATGCTTCACTTACTCTTATTAG 477 0.4319 MLAQTWYFPRTPCRHFPNPPPLHPHLQSPTSSKISNSHQNPLSKPPNSSISKPPKKPDSVLNFFRTHGFTDSDIHKIIQREPWLLSCDTQKRVLPKFQFLLSISLRNVFPLFSANFHRNVDDSTQRYPLLPETEFSECISCFARERAKSCNRCFTYSY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03987 158 Gene3D Transcription termination factor 3, mitochondrial 32 155 IPR038538 -
Vifa6g03987 158 MobiDBLite consensus disorder prediction 18 56 - -
Vifa6g03987 158 Pfam mTERF 61 104 IPR003690 GO:0003690|GO:0006355
Vifa6g03987 158 PANTHER CGI-12 PROTEIN-RELATED 35 104 IPR003690 GO:0003690|GO:0006355
Vifa6g03987 158 SMART mt_12 75 106 IPR003690 GO:0003690|GO:0006355
Vifa6g03987 158 MobiDBLite consensus disorder prediction 27 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03987 Vifa-Chr6 1314646642 1314647118 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa6g03987 mTERF 7.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03987 K15032 - gmx:102663414 74.7146