Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03986 ATGGCTGCGAAACGTCTTTTAGATGATTCTGATCAAGACAAACACAAACGTATCAGAACTACAACAACACCTTCTTTTGCCTCGGTAATAGGAGAAGTTGTTATGGTGAAAAACATGCAAAACCTTTTCTCTGGCTTGGAACCATTACTTAGAAGAGTGGTGAACGAAGAAGTGGAGCGTGCAATGAAACAATGTTATCCATCGCGATCAATAACAAGATCACCTTCATTGAGGCTTCAAGCAATGGAACATCCATCAAGTTTTCAATTCATTTTCAAAAAGAAGCTTTCACTTTCAATATTCACCGGTAGTAGATTACAAGACATGGATGGAAACTCAATCAATGTCATTCTTGCTGACAAAAGCAGTGGCCAAAATGTTCCTACAAGTCTACCTCCGCCAATCAAGATAGAAATTGTAGTTCTTGATGGAGATTTTCCATCTAGTGAAAAGGAATCATCATGGAATAGTGAAGAATTCAATAGTAATATTGTGAAAGAAAGAATCGGGAAAAGGCCATTGCTTACCGGAGAATTGAATGTTACTATGAGAGATGGAATTGCACCAATTGGAGATATTGAGTTCACCGATAATTCAAGCTGGATTCGTAGCAGAAAGTTTAGACTTGGTGTTAGAGTTGTGCCAGGGACTAATCAAAATGTTCAAATTCGTGAAGGCATGACGGAGCCTTTTGTTGTTAAGGATCATCGCGGAGAATTGTACAAGAAACACCATCCACCAAGTCTAAATGATGAAGTGTGGCGTTTAGAGAAGATCGGAAAAGATGGAGCATTCCACAAAAAATTGACTTTGGCAAAAATTACAACAGTTCAAGAGTTTCTCAAATTATCTGTAATTGATCCTCAACGACTCCGAAAGATATTAGGCATTGCAATGTCAGAGAAAATGTGGGATGCAACAATGAAACATGCAAAGACTTGTGTAATGGAAAACAAAGTTTATGTGTACCGTGGGCCTCAATTTACCATTCATCTGAATGCGATATGCCAAATGGTTAGAGCTTATAACATCAATGGCCAAACCATTCCCAACAGAGACATTAACAACATCAACAAGAGCTTGATACAAAACTATGTGAGAGAAGCATATGCTAGATGGAATGAGTTGGAGGAAATTGAAGAAGGTTTGAATGATAATGTGGAACCAACTCAGTTTCAAAACAATAATAATCATCAATCATCAGTTATAGGATATGATCAGAATCAGTATTTTGGTGATAAATGTATAGAGGGTGGCAATTATGTTGCAAACAACATTAATAGTAATAATTCAGAAATTGGGTGTATAGAATGGTCACCCTTTGCCACTTCACTATTCATGAATGGAATGCATTATAGTTTTCCAGAGTCACAATCAGATGGTGGTGATATAACACCTTCAAGTTCAGGACCAGTCATTGGTGGAGCCTCCTCAAGGTGGCATTGA 1446 0.3776 MAAKRLLDDSDQDKHKRIRTTTTPSFASVIGEVVMVKNMQNLFSGLEPLLRRVVNEEVERAMKQCYPSRSITRSPSLRLQAMEHPSSFQFIFKKKLSLSIFTGSRLQDMDGNSINVILADKSSGQNVPTSLPPPIKIEIVVLDGDFPSSEKESSWNSEEFNSNIVKERIGKRPLLTGELNVTMRDGIAPIGDIEFTDNSSWIRSRKFRLGVRVVPGTNQNVQIREGMTEPFVVKDHRGELYKKHHPPSLNDEVWRLEKIGKDGAFHKKLTLAKITTVQEFLKLSVIDPQRLRKILGIAMSEKMWDATMKHAKTCVMENKVYVYRGPQFTIHLNAICQMVRAYNINGQTIPNRDINNINKSLIQNYVREAYARWNELEEIEEGLNDNVEPTQFQNNNNHQSSVIGYDQNQYFGDKCIEGGNYVANNINSNNSEIGCIEWSPFATSLFMNGMHYSFPESQSDGGDITPSSSGPVIGGASSRWH 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03986 481 MobiDBLite consensus disorder prediction 457 481 - -
Vifa6g03986 481 Pfam Calmodulin binding protein C-terminal domain 319 379 IPR046829 -
Vifa6g03986 481 Pfam Calmodulin binding protein central domain 248 314 IPR046830 -
Vifa6g03986 481 Pfam Calmodulin binding protein-like N-terminal domain 89 236 IPR046831 -
Vifa6g03986 481 PANTHER OS02G0177800 PROTEIN 1 453 IPR012416 GO:0005516
Vifa6g03986 481 MobiDBLite consensus disorder prediction 457 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03986 Vifa-Chr6 1314538728 1314540754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03986 3 374 Calmodulin-binding Proteins AT5G57580 49.206 6.58e-115 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03986 - - gmx:100802257 605.905