Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03974 ATGCAAACTGAAGGACGAGCGGGGAAATTATCTGTGCATGTTCAGAATCATGAGCTAGCAGGCTCCATGGCACTAGCAGTATTTGTGTCTATAACTGTAACTGGACATGCTGGATATGCTGGGGTTGGACTGAACCCAGCAAGATGCTTAGGCCCGGCACTGCTTCACGGAGCGTCTGTATGGAATGGACATTGGGTTTTTTGGGCTGGTCCTTTTTTAGCCTGCTTAGTGTACTACAGTGTCTCTATTAATCTGCCAAAAGAAGGTTTGGATTGGGTTGATGGAGAATATGCTGTCTTAAGGTTGGCTATGGGTTTTTGTGAGAGATTGTCTCTGCTAGTGCAGTCTCAAACGATACTGGGTTGTAAAACAACATAG 378 0.455 MQTEGRAGKLSVHVQNHELAGSMALAVFVSITVTGHAGYAGVGLNPARCLGPALLHGASVWNGHWVFWAGPFLACLVYYSVSINLPKEGLDWVDGEYAVLRLAMGFCERLSLLVQSQTILGCKTT 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03974 125 SUPERFAMILY Aquaporin-like 20 77 IPR023271 -
Vifa6g03974 125 PANTHER AQUAPORIN-LIKE 7 104 - -
Vifa6g03974 125 Pfam Major intrinsic protein 21 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vifa6g03974 125 Gene3D Glycerol uptake facilitator protein. 10 87 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03974 Vifa-Chr6 1311726683 1311727060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03974 39 86 Major Intrinsic Protein MIP AT2G25810 44.231 2.75e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03974 K09866 - gmx:100797262 162.925