Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa6g03967 | ATGAATTCCCCATCTGATAGAAAGATAAAAATACCCAAAGAATTGGATAGTCTAGATGACATATTCAATGGAATTGAAAGAAATGGTCATTTAGGATTATCGGATCAGGGTGAGGTTGAAGGTAAACATCGATTGGTTTTGGTTCAATGGTTAAATAGTCTTGTTCCTTCATTGGACTTCTCGACAACTGTCACGGATGGTGAGTTAAGAGCGAGTTTAAGCAATGGTACAGTTTTGTGCCAGATACTGAACAAACTACGACCCGGCTCCGTGACTATGGTCAGTGAATCTGATCATTCGCTGCCATCACAATCCGAAAACGTTAGAACCTTTCTGAAAGCTTTGGATGGATTGGGGTGTCCGCGGTTTGAGATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTGAGAATCAAAAGCTTGATGAATACTTTGGGAGAGAATGTTTCTTCAACTAGTTCAACTGCATCGAGCCCTCGTGGATATGCGGCTTCAAGTTTTCATTATTCCCCGCCATTTAGTGTGGATAAGCGGAGGGCTTCATCTGAGTCGAGGTTTCATCACATTATGAGTAGCCCTGTTATGGCGGAACCGTCGGCTTCATTAATATACCAAGTTGGTAATAAGTTCCATGAGGTGTTTCAAATTAAACCTAGAAGCTACGCAGATCTTCCTGCTGCAAAAATATCCGAAATGATGAAATCAAATAGTTTAGATAATGCTCCCACTCAGTCGCTACTAAGTGTAGTCAATGGTATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGGGTTGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAGCGCCGCATATCAACTCAAGCAGAACATTTACGAACTCAAAGTAATCTTTTTAAGGCCCGGGAAGAAAAGTATCAGTCGAGAATAAGAGTACTCGAGGCAATTGCATCTGGAAATAAAGAAGAGAGTGAGATATTCTTCGCTAGCCAGCGTCAACAGTTGAAGGTTGAGAAGATCAAAGAGGAAGAAAAGAAGGAAAATGAAAAAAAAATGATTCGGTTGATGAAAATGCTAGAGGACAAAAATTTGGTAATTTTAGAATTGACACAAAAACTGGAAGCAACCAAAAGCCAATATGAAACGCAATGCTCGCAGTTGGAAGACGAAGCTGGAGATGCTAAAGCAGAATTGAGACAGAAATCTCAAGAATATGAGCATCAATCAGAAGAGTTGAGGAATGAGGTTAAAGAACTCGAGACTTCTTCGGATTCAAAATATCAGGAGTGGAACATGAAAAAGAACCAATTGCAGGCTGTTGTAAATTTTCAATTTAGTTCCCTACAGAAATTGAAATTATCTTGGGAATCGATTAGGCAAGATGTTATGAACGAGCAAACGGTTTATGCAGAAGAGTGTAATCGATTAGGGGTAAATCTCAAACCACTCATACATGCATCTCAGAACTATCAAGTCATCCTCGCTGAAAATAAAAAAATGTTTAACGAAATTCAAGAACTAAAAGGAAACATCAGAGTATTTTGTCGAATTAGACCATTCCTTACAGGCAAAAAGGAAACACATTCAATTATAGAAGACATAGGTGAAAATGATTTGGTTGTGGAAAATCCCTCCAAAGGGAAAGATGCGCTTCGATCATTTAAGTTCAACAAGATATTCAGTCCTTCCGTGACTCAAGGGGATGTATACTCTGATATTCAACCTTTTGTAAGATCGGTACTAGATGGATATAATGTCTGTATGTTCGCTTACGGCCAAACAGGTTCGGGGAAGACTTACACAATGACTGGTCCAAGTGGAGCAACAAACGAAAATCTTGGTGTTAATTATCGAGCTCTAAACGATCTCTTTAGAATTTCCACAAGTAGGGCAGGCTTCACAGGCTATGAGATTTGGGTTCAAATGGTAGAGATATATAACGAGCAAGTTCGTGACTTGTTATCAACCGACGATTCTCAAAAAAGTTGGGATATTGACTCAATCTCATTCCAACGAGCTATTGGCGCGACCGCTATGAATGAAAGAAGTAGCCGTTCTCATAGTGTGGTCTCGATTCATGTTCGTGGGAAGGATTTCAGGTCAGGTTCTACTCTGCATGGCAATCTTCATTTGGTAGATTTGGCGGGAAGTGAAAGAGTAGATCGTTCTGAAGTAACCGGAGATAGGCTTAGAGAAGCGCAACATATAAACAAATCACTTTCTGCCCTCGGAGATGTCATTTTCGCCCTTTCTCAAAAGAGCTCCCATGTACCATATAGAAACAGCAAGCTTACTCAACTTCTGCAAAATTCTCTCGGTGGTCAAGCAAAGACTCTGATGTTTGTCCAAATTAACTCGGACGCGAGTTCATATTCTGAAACTCTGAGTACTTTGAAGTTTGCTGAGAGAGTTTCTTCGATTGAACTAGGAGCTGCACGGAATAGCAAGGAGGCGAGAGAATTAATGGAACAGGTGACTTGTATGAAGAACGCGATTTCGAAAAAAGATGAGGAGATTGAGCGTCTTAAATCGCTAAACGCGCCTGTTGCTGGTATTTCTAAGCAAATTCAAAAACAATCAAGTGGAAGTTTTAAGCATCTTGTTGAAGGATTTTCAGATACAGGTCTTAACGATAGATCAAGTGAAATCTCTGACAATCATAGTCTTGCTTTGGGCAACGAAACTGATGGTTCTTCTGATAACTCCATTAGGAGTCGCGAAAACAGAAAAACTTCTGATAACATGAAGAAGTCTAAAGTATTAACCAAACCTGCTAAACCGGTAAGGAAATTAGGCCGAATTCCCTCTAATGTGGGTATAGATAAGGACTCCTTGAAGAAAGCACCAGGTCTCACAAAAAGCCCGAGTATTAGCCACATTAAAGCTTCGAAAAGGTGGCAGTAA | 2922 | 0.4011 | MNSPSDRKIKIPKELDSLDDIFNGIERNGHLGLSDQGEVEGKHRLVLVQWLNSLVPSLDFSTTVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVRTFLKALDGLGCPRFEISDLEKGSMKPVVDCLLILRIKSLMNTLGENVSSTSSTASSPRGYAASSFHYSPPFSVDKRRASSESRFHHIMSSPVMAEPSASLIYQVGNKFHEVFQIKPRSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHLRTQSNLFKAREEKYQSRIRVLEAIASGNKEESEIFFASQRQQLKVEKIKEEEKKENEKKMIRLMKMLEDKNLVILELTQKLEATKSQYETQCSQLEDEAGDAKAELRQKSQEYEHQSEELRNEVKELETSSDSKYQEWNMKKNQLQAVVNFQFSSLQKLKLSWESIRQDVMNEQTVYAEECNRLGVNLKPLIHASQNYQVILAENKKMFNEIQELKGNIRVFCRIRPFLTGKKETHSIIEDIGENDLVVENPSKGKDALRSFKFNKIFSPSVTQGDVYSDIQPFVRSVLDGYNVCMFAYGQTGSGKTYTMTGPSGATNENLGVNYRALNDLFRISTSRAGFTGYEIWVQMVEIYNEQVRDLLSTDDSQKSWDIDSISFQRAIGATAMNERSSRSHSVVSIHVRGKDFRSGSTLHGNLHLVDLAGSERVDRSEVTGDRLREAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQNSLGGQAKTLMFVQINSDASSYSETLSTLKFAERVSSIELGAARNSKEARELMEQVTCMKNAISKKDEEIERLKSLNAPVAGISKQIQKQSSGSFKHLVEGFSDTGLNDRSSEISDNHSLALGNETDGSSDNSIRSRENRKTSDNMKKSKVLTKPAKPVRKLGRIPSNVGIDKDSLKKAPGLTKSPSISHIKASKRWQ | 973 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa6g03967 | 973 | Pfam | Kinesin motor domain | 677 | 813 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa6g03967 | 973 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 347 | 922 | IPR027640 | GO:0003777|GO:0007018 | |
Vifa6g03967 | 973 | Gene3D | - | 35 | 148 | IPR036872 | - | |
Vifa6g03967 | 973 | ProSiteProfiles | Kinesin motor domain profile. | 516 | 813 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa6g03967 | 973 | SMART | ch_5 | 43 | 143 | IPR001715 | GO:0005515 | |
Vifa6g03967 | 973 | Pfam | Calponin homology (CH) domain | 46 | 143 | IPR001715 | GO:0005515 | |
Vifa6g03967 | 973 | Gene3D | Kinesin motor domain | 457 | 672 | IPR036961 | - | |
Vifa6g03967 | 973 | ProSiteProfiles | Calponin homology (CH) domain profile. | 41 | 148 | IPR001715 | GO:0005515 | |
Vifa6g03967 | 973 | Coils | Coil | 824 | 844 | - | - | |
Vifa6g03967 | 973 | MobiDBLite | consensus disorder prediction | 882 | 973 | - | - | |
Vifa6g03967 | 973 | Gene3D | - | 346 | 394 | - | - | |
Vifa6g03967 | 973 | FunFam | p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain | 458 | 669 | - | - | |
Vifa6g03967 | 973 | Gene3D | Kinesin motor domain | 673 | 852 | IPR036961 | - | |
Vifa6g03967 | 973 | MobiDBLite | consensus disorder prediction | 906 | 926 | - | - | |
Vifa6g03967 | 973 | SMART | kinesin_4 | 514 | 821 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa6g03967 | 973 | SUPERFAMILY | Calponin-homology domain, CH-domain | 44 | 149 | IPR036872 | - | |
Vifa6g03967 | 973 | Pfam | Microtubule binding | 503 | 660 | IPR031852 | GO:0008017 | |
Vifa6g03967 | 973 | Coils | Coil | 365 | 435 | - | - | |
Vifa6g03967 | 973 | Coils | Coil | 336 | 358 | - | - | |
Vifa6g03967 | 973 | MobiDBLite | consensus disorder prediction | 882 | 905 | - | - | |
Vifa6g03967 | 973 | PRINTS | Kinesin heavy chain signature | 589 | 610 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa6g03967 | 973 | PRINTS | Kinesin heavy chain signature | 763 | 784 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa6g03967 | 973 | PRINTS | Kinesin heavy chain signature | 683 | 700 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa6g03967 | 973 | PRINTS | Kinesin heavy chain signature | 714 | 732 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa6g03967 | 973 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 516 | 849 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa6g03967 | Vifa-Chr6 | 1309405866 | 1309411084 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa6g03967 | 401 | 844 | Calmodulin-binding Proteins | AT5G65930 | 35.908 | 8.45e-66 | 239 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa6g03967 | K10406 | - | tcc:18604123 | 967.222 |