Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03955 ATGATACAACTATTCCTCTTTTTCACACTCACCTTCATTCTCATCATCACCACCACCTTCATCCTCCGTTCAAAACAGCCCAAGCATGACAGAAAACACCCACCAGGTCCACCAGGCTATCCTCTCATTGGTAACCTCCACATGTTAGGCACCCTCCCACACCGTTCCCTCGAAGCCTTATCCAAAAAACATGGTCCCATCATGTCACTCCGTTTAGGCCAAGTCCCAACAGTCATAGTCTCTTCCTCTTCAGCAGCCGAACAATTCCTCAAAGCAAACGACCTCGCTTTCGCCAGCCGTCCTAAACTCGAAGCCACGCACTACCTATCTTACGGTTCTAAGGGGTTAATTTTTGCTGAATATGGCGCGTATTGGCGTAACATGAGGAAGATTTGCACTCTGCAGCTTTTAAGTGCTTCTAAAGTTGAGACGTTTGCGTCTTTGAGGAAGAGAGAAATGGAGTCAGCTTTGAAGTTGTTGAAGAAAGCTGCGAGTTCGGGTGAGGTTGTTGATGTGAGTGAGTTTGTGCATGATGTTATAATGGATATTGTGTGTAAGATGGTGTTGGGGTGTAGTATTGATGAGGTTTTTGATTTGAAGAGGCTGATTCAACAAGGGACGAACCTTTCTGGTGCTTTTAATCTTGCTGATTATGTTCCTTTTCTTCGAGTTTTTGATCTTCAGGGTATAAGAAGAAGATACAAGAGAACTCATAAAGAACTTGACCAAGTCTTGGAGAAGATAGTTAAGGAGCATAAAGAAAGTTCAGATGTACAGAATGGAGGACAGAAGCATAAGGACTTTATAGACATTCTACTGTCACAGATGCACCAGCCGATCGGTCCCTCTGATGAGCAAAACAACGTCGTTGATCGAACAAATATAAAGGCTATAGTCTTAGACATGATTGCTGCTGCATTCGAAACTTCTGCTACCGTCGTGGAGTGGGCTTTATCCGAGCTCATGAGACATCCAAGAGTAATGAAAAATCTCCAACAAGAGTTAGATAATGTGGTTGGGGTCAACAAAGTGGTGGAGGAAAATGATTTGTCAAAGTTAAGTTACTTAGATATTGTGATCATGGAGACGTTAAGATTATATCCCGCAGGGCCACTCGTGCCACGCGAGTCAACGGAGGATGCTACAGTTGATGGTTATTTCCTAGAAAAGAAATCAAGAATCATTGTGAATTTATGGGCGATAGGAAGAGATTCTAAGATATGGTCCGACAATGCGGAAGAATTTTATCCAGAGAGATTCGTGGATAAAAATTTAGATTACCGCGGAAATGATCTCCAGTTTATACCATTTGGTTTTGGTCGAAGAGGATGTCCTGGAATAAACATGGGACTAATTACAGTGAAACTTGTTGTCACTCAACTGGTGCATTGTTTTTCTTGGGATCTTCCCTCGAATATGACTCCAAATGATTTGGACATGACAGAAAAGTTTGGTCTTTCAATCCCAAGAGCCAAACACTTGCTTGCGGTGCCAAAATATCGTCTTCACGGGGAAGCAACATGA 1524 0.4272 MIQLFLFFTLTFILIITTTFILRSKQPKHDRKHPPGPPGYPLIGNLHMLGTLPHRSLEALSKKHGPIMSLRLGQVPTVIVSSSSAAEQFLKANDLAFASRPKLEATHYLSYGSKGLIFAEYGAYWRNMRKICTLQLLSASKVETFASLRKREMESALKLLKKAASSGEVVDVSEFVHDVIMDIVCKMVLGCSIDEVFDLKRLIQQGTNLSGAFNLADYVPFLRVFDLQGIRRRYKRTHKELDQVLEKIVKEHKESSDVQNGGQKHKDFIDILLSQMHQPIGPSDEQNNVVDRTNIKAIVLDMIAAAFETSATVVEWALSELMRHPRVMKNLQQELDNVVGVNKVVEENDLSKLSYLDIVIMETLRLYPAGPLVPRESTEDATVDGYFLEKKSRIIVNLWAIGRDSKIWSDNAEEFYPERFVDKNLDYRGNDLQFIPFGFGRRGCPGINMGLITVKLVVTQLVHCFSWDLPSNMTPNDLDMTEKFGLSIPRAKHLLAVPKYRLHGEAT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03955 507 CDD CYP71-like 63 494 - -
Vifa6g03955 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 Pfam Cytochrome P450 34 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vifa6g03955 507 FunFam Cytochrome P450 83B1 20 497 - -
Vifa6g03955 507 Coils Coil 328 348 - -
Vifa6g03955 507 PANTHER CYTOCHROME P450 93A3-LIKE 10 503 - -
Vifa6g03955 507 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 Coils Coil 227 251 - -
Vifa6g03955 507 SUPERFAMILY Cytochrome P450 34 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03955 507 Gene3D Cytochrome P450 20 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03955 Vifa-Chr6 1306867818 1306869475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03955 1 502 Cytochrome P450 AT5G07990 37.891 4.04e-121 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03955 - - gmx:100814172 665.996