Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03941 ATGCTTTGTTGGCCCACAAAGCTTTCCCTATACAAAGAAGTGGGGAACAGAGCTAGGTTGGCGTGTTGCATGGCACATGCCATGTTGTTTGGTATGACCCCCTGTGTCAGTGTAAGAAAAAATGTGATTCCTCAAGTTTTGCATGCTAGTGTTATTGTTGAGCTTGCTACTGTTGTTAAGTTTTTTAGAAGGCTTGATGTGGAGAAAGATGATATTGGGTTTGTGTTGCAGAAATATCCTGAAATTTTAGGGTTGAAGTTTGAAGGGACTATGAGCACTTCCGTGGAGTATCTTGTTAGTATTGGTGTTAGTCTGAGGGATATTAGTCATATGGTTACTCAGTATCCTTGTCTTTTAGGGATGAAAGTTTAG 372 0.4032 MLCWPTKLSLYKEVGNRARLACCMAHAMLFGMTPCVSVRKNVIPQVLHASVIVELATVVKFFRRLDVEKDDIGFVLQKYPEILGLKFEGTMSTSVEYLVSIGVSLRDISHMVTQYPCLLGMKV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03941 123 Gene3D Transcription termination factor 3, mitochondrial 33 123 IPR038538 -
Vifa6g03941 123 SMART mt_12 39 68 IPR003690 GO:0003690|GO:0006355
Vifa6g03941 123 SMART mt_12 73 104 IPR003690 GO:0003690|GO:0006355
Vifa6g03941 123 Pfam mTERF 43 123 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa6g03941 mTERF 1.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03941 K15032 - gmx:100809590 128.642