Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03927 ATGGTTGATTCAAGTTCAGTTTCTACAAAGAGAATGTGGTATTCAATTCCTGAAAAGTTTCAACTACATGCGGCTATGTTGGCTTTACAGTTTGTTTGTGCTGGTTTTCATGTTGTCTCAAGGGCTGCCCTTAATATGGGAATTAGTAAATATGTTTTTTCTGTCTATAGAAATATTATTGCTCTTCTTCTACTCCTTCCCTTTGCATATTTCTTTGAAAAGAAGAAGAGACCGCCGATTAATTTTAATTTTCTCTGTCAATTCTTTTTTCTAGCACTTATTGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGTTTGGAGAACACAACTCCAACCTTTGCATCAACAGTACAAAATTGTATCCCTGCCATAACATTTTTCATTGCAGTAATTCTAAAGATAGAGAAAGTGAAACTTAAGAGAAAAGATGGATTGGCAAAAGTAGCAGGAACAATATTCTGTGTAATTGGTGCAACAATAATTACATTATACAAAGGTCCAACCATATATACTCCAAGTAGTCACTTAAATAACACTTCAAAAATGATAACTGAAGTAACAACAACACCAATGATTGATTTTTTGAAAATGTCACTTGGTGATGCTAAGGGGAAAAATTGGACACTTGGTTGTGTTTATCTTTTTGGACATTGTTTATCTTGGTCTACCTGGCTTGTGCTTCAAGCACCTATGCTTAACAAGTATCCAGCTCGTCTTTCTCTCACTTCTTATACATGTTTCTTTGGTCTCTTGCAATTTCTTCTTATTGCTATGCTTTGCGAAAGAAATGCTCAAGCCTGGTTATTTAACTCAAGCGGCGAAATTTTTACTATTTTATATGCCGGAGTGGTGGTATCTGGAATTGCATCTGCAATACAAATTTGGTGTATCGATAGACAAGGTCCTCTATTTGTTGTTGTGTATCAACCTGTTCAAACTTTTCTTGTTGCTTTCATGGCTTCTATTGCTTTAGGAGAAGAGTTTTACTTGGGAGGGATCATTGGGGCAATATTGATTGTTGTTGGACTATACTTTGTTTTGTGGGGTAAAAGTGAAGAGAATAAATTTGCAAATGAACAACTTGCAATTGGATCATCTACCACAGAACATAGCGACATTAGGCCTACGAGTGGTGCTAAAGAATCATCACTCATTGAACCATTTCTCTCTTCATCGACAGAAAATGTTTGA 1194 0.3585 MVDSSSVSTKRMWYSIPEKFQLHAAMLALQFVCAGFHVVSRAALNMGISKYVFSVYRNIIALLLLLPFAYFFEKKKRPPINFNFLCQFFFLALIGITANQGFYLLGLENTTPTFASTVQNCIPAITFFIAVILKIEKVKLKRKDGLAKVAGTIFCVIGATIITLYKGPTIYTPSSHLNNTSKMITEVTTTPMIDFLKMSLGDAKGKNWTLGCVYLFGHCLSWSTWLVLQAPMLNKYPARLSLTSYTCFFGLLQFLLIAMLCERNAQAWLFNSSGEIFTILYAGVVVSGIASAIQIWCIDRQGPLFVVVYQPVQTFLVAFMASIALGEEFYLGGIIGAILIVVGLYFVLWGKSEENKFANEQLAIGSSTTEHSDIRPTSGAKESSLIEPFLSSSTENV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03927 397 MobiDBLite consensus disorder prediction 369 397 - -
Vifa6g03927 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Vifa6g03927 397 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Vifa6g03927 397 Pfam EamA-like transporter family 210 348 IPR000620 GO:0016020
Vifa6g03927 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 352 - -
Vifa6g03927 397 PANTHER WAT1-RELATED PROTEIN 24 361 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03927 Vifa-Chr6 1300295854 1300297572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03927 1 397 Nodulin-like Gene Family AT1G75500 65.915 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03927 - - tpra:123886836 624.394