Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03872 ATGTCTGATGGAGGAAGAAGAGTAAAACCAAAGCTCGCAATTAAGAGGAAACCAAGAAATCATAAAAGAGAAACTCTACCATCACCACCACCACCAGAATTGCCTAATCATGTTAATGACATAATCAAAGTGTTGAATGACATTGATATTAAATATATAATGTGTAAGACATTATGTAACACCGATCTTAGCTATAACAACAAACGTCTTTCAATGCCAATTTCACAAATTAGATCTGATTTCCTGACCGAAATAGAAAAGTCAATCTTAGAAACAAGGGATCAAGAAGGAAAACCAGCTACTTTAAAGGTTACTGTATTAGATCCTTGTTTGAATGAATTCTCATTACATTTGAAGAAGTGGAATATGACCACTACTAGCATTTATAATCTTGCTCAAGACTGGACAAAGGTTTTGTCAAAGAATAATTTTAGGAAGAATCAAAAAATTGATATTTGGTCATTCAGGGTTAATGACAAGTTATACTTTTTACTTGATACTAATGAGTCGGAAGAAATTGAAGAAAGGGAAAAATCAAACAAATCAATTGTGATTTCGACAATGGAAGAAGAAAAGAAGTCAAATGTTGAAGATTGTTGA 600 0.3217 MSDGGRRVKPKLAIKRKPRNHKRETLPSPPPPELPNHVNDIIKVLNDIDIKYIMCKTLCNTDLSYNNKRLSMPISQIRSDFLTEIEKSILETRDQEGKPATLKVTVLDPCLNEFSLHLKKWNMTTTSIYNLAQDWTKVLSKNNFRKNQKIDIWSFRVNDKLYFLLDTNESEEIEEREKSNKSIVISTMEEEKKSNVEDC 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03872 199 MobiDBLite consensus disorder prediction 1 37 - -
Vifa6g03872 199 Pfam B3 domain-containing protein At2g31720-like 35 140 IPR005508 GO:0003677
Vifa6g03872 199 Gene3D - 37 170 IPR015300 -
Vifa6g03872 199 SUPERFAMILY DNA-binding pseudobarrel domain 52 171 IPR015300 -
Vifa6g03872 199 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 16 167 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03872 Vifa-Chr6 1283008627 1283009226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03872 38 165 B3 DNA Binding Superfamily AT1G05930 27.692 1.38e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03872 - - psat:127101787 251.521