Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03871 ATGAAAAAGAAAATTATGGCTATTGAGAAGATCAATATATATATGCAAAAATTGGAAACAATGAAAAAGAAATTTGACCCATTACCTCATTTTACTTTGCATAGTGTGTTATCTCAACTTTCTCCACAGTTTTATACCGAAGAAGAGTTAACACAAATAGAGAAAGTCAATCAAATTTTGTATCAAGAAGCAAATATTCCTCTTGTTTCACAAAATAAAGTGGAAAGAACAGAAATCAACAACTTAAAAAGGTGTCGGCCAAGTAATGAAGCCAGTAGCATGTCTGATGGAGGAAGAAGAGTAAAACCAAAGCTCGCAATTAAGAGGAAACCAAGAAATCATAAAAGAGAAACTCTACCATCACCACCACCACCAGAATTGCCTAATCATGTTAATGACATAATCAAAGTGTTGAATGGCATTGATATTAAATATATAATGTGTAAGACATTATGTAACACCGATCTTAGCTATAACAACAAACGTCTTTCAATGCCAATTTCACAAATTAGATCTGATTTCCTGACCGAAATAGAAAAGTCAATCTTAGAAACAAGGGATCAAGAAGGAAAACCAGCTACTTTAAAGGTTACTGTATTAGATCCTTGTTTGAATGAATTCTCATTACATTTGAAGAAGTGGAATATGACCACTACTAGCATTTATAATCTTGCTCAAGACTGGACAAAGGTTTTGTCAAAGAATAATTTTAGGAAGAATCAAAAAATTGATATTTGGTCATTCAGGGTTAATGACAAGTTATACTTTTTACTTGATACTAATGAGTCGGAAGAAATTGAAGAAAGGGAAAAATCAAACAAATCAATTGTGATTTCGACAATGGAAGAAGAAAAGAAGTCAAATGTTGAAGATTGTTGA 879 0.3185 MKKKIMAIEKINIYMQKLETMKKKFDPLPHFTLHSVLSQLSPQFYTEEELTQIEKVNQILYQEANIPLVSQNKVERTEINNLKRCRPSNEASSMSDGGRRVKPKLAIKRKPRNHKRETLPSPPPPELPNHVNDIIKVLNGIDIKYIMCKTLCNTDLSYNNKRLSMPISQIRSDFLTEIEKSILETRDQEGKPATLKVTVLDPCLNEFSLHLKKWNMTTTSIYNLAQDWTKVLSKNNFRKNQKIDIWSFRVNDKLYFLLDTNESEEIEEREKSNKSIVISTMEEEKKSNVEDC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03871 292 MobiDBLite consensus disorder prediction 84 129 - -
Vifa6g03871 292 SUPERFAMILY DNA-binding pseudobarrel domain 145 264 IPR015300 -
Vifa6g03871 292 Gene3D - 131 263 IPR015300 -
Vifa6g03871 292 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 57 260 IPR005508 GO:0003677
Vifa6g03871 292 Pfam B3 domain-containing protein At2g31720-like 127 233 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03871 Vifa-Chr6 1282763655 1282764533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03871 134 258 B3 DNA Binding Superfamily AT1G05930 28.346 1.34e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03871 - - psat:127101787 357.836