Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03870 ATGGCTATAGAGGAGAAAAGTGCATTGTTACAAAACTCAGAAGAAGTCCTGATGAAAAAGAAAATTATGGCTATTGAGAAGATCAATATATATATGCAAAAATTGGAAACAATGAAAAAGAAATTTGACCCATTACCTCATTTTACTTTGCATAATGTGTTATCTCAACTTTCTCCACAGTTTTATACCGAAGAAGAGTTAACACAAATAGAGAAAGTCAATCAAATTTTGTATCAAGAAGCAAATATTCCTCTTGTTTCACAAAATAAAGTGGAAAGAACAGAAATCAACAACTTAAAAAGGTGTCGGCCAAGTAATGAAGCCAGTAGCATGTCTGATGGAGGAAGAAGAGTAAAACCAAAGCTCGCAATTAAGAGGAAACCAAGAAATCATAAAAGAGAAACTCTACCATCACCACCACCACCAGAATTGCCTAATCATGTTAATGACATAATCAAAGTGTTGAATGGCATTGATATTAAATATATAATGTGTAAGACATTATGTAACACCGATCTTAGCTATAACAACAAACGTCTTTCAATGCCAATTTCACAAATTAGATCTGATTTCCTGACCGAAATAGAAAAGTCAATCTTAGAAACAAGGGATCAAGAAGGAAAACCAGCTACTTTAAAGGTTACTGTATTAGATCCTTGTTTGAATGAATTCTCATTACATTTGAAGAAGTGGAATATGACCACTACTAGCATTTATAATCTTGCTCAAGACTGGACAAAGGTTTTGTCAAAGAATAATTTTAGGAAGAATCAAAAAATTGATATTTGGTCATTCAGGGTTAATGACAAGTTATACTTTTTACTTGATACTAATGAGTCGGAAGAAATTGAAGAAAGGGAAAAATCAAACAAATCAATTGTGATTTCGACAATGGAAGAAGAAAAGAAGTCAAATGTTGAAGATTGTTGA 930 0.3215 MAIEEKSALLQNSEEVLMKKKIMAIEKINIYMQKLETMKKKFDPLPHFTLHNVLSQLSPQFYTEEELTQIEKVNQILYQEANIPLVSQNKVERTEINNLKRCRPSNEASSMSDGGRRVKPKLAIKRKPRNHKRETLPSPPPPELPNHVNDIIKVLNGIDIKYIMCKTLCNTDLSYNNKRLSMPISQIRSDFLTEIEKSILETRDQEGKPATLKVTVLDPCLNEFSLHLKKWNMTTTSIYNLAQDWTKVLSKNNFRKNQKIDIWSFRVNDKLYFLLDTNESEEIEEREKSNKSIVISTMEEEKKSNVEDC 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03870 309 Pfam B3 domain-containing protein At2g31720-like 144 250 IPR005508 GO:0003677
Vifa6g03870 309 SUPERFAMILY DNA-binding pseudobarrel domain 162 281 IPR015300 -
Vifa6g03870 309 Gene3D - 148 280 IPR015300 -
Vifa6g03870 309 MobiDBLite consensus disorder prediction 100 146 - -
Vifa6g03870 309 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 63 277 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03870 Vifa-Chr6 1282651616 1282652545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03870 151 275 B3 DNA Binding Superfamily AT1G05930 28.346 1.76e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03870 - - psat:127101787 365.155