Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa6g03830 | ATGAAGATCGAGGAATTGGATGACGCAGAGTGTTGTAGGGAAGAAGAAGAGAATTTGGAGAGACAAATCGTTAGGGTTGATGCGAAGAGAGCGTTGGTTGGAGCAGGTGCGCGGATTCTGTTTTATCCAACACTTTTGTATAACGTGCTGAGAAACAAAATGGAAGCTGAGTTCAGATGGTGGGATCAAATTGATGAGTTTTTGTTGCTGGGTGCAGTACCGTTTCCTAAAGATGTTCCTCATTTGAAGAACCTCGGTGTTGGCGGTGTAATTACTCTGAATGAACCGTATGAAACTTTGGTACCGTCTTCATTGTATCGTGCTCATGGGATTGATCATTTGGTAATTCCCACAAGAGATTATCTCTTTGCTCCCTCATTTGTGGATATCAACCGGGCTGTGCAGTTCATTCATTATAATGCTACTTGTGGTAAAACTACTTATGTTCACTGTAAAGCTGGGCGTGGGAGGAGTACAACAATTGTGCTTTGTTATTTGGTTGAATACAAGCACATGACTCCTGCTGCTGCCCTTGAGTATGTGCGGTCTCGAAGACCTAGAGTGCTACTAGCACCATCACAGTGGAAGGCGGTTCAAAGTTATAACAATCAAAGACCTTCTTCTTTACCACACTCTCCTTCTGGAGACACAGTTCAGGCTGTTCAATGTTATAACAATCAAAGACCTTCTCCTTTACCACACTCACCTTCTGGTGACACAGTTCTCATAACCAAAGATGATCTTGAAGGCTATCATAGCACATCTGATACAAGTATGGAGCTGGCTATCGTGCCTAAAGTGCCAAAGACTAAGCCCATGATAGCACGACTATCTTGCCTTTTTGCATCCTTAAAAGTATCAGGTAGTAGTGTTCCAATGACAAGGCGGCTACCAGTTTCAGAGTCGCGTGCTTGCTAA | 918 | 0.4346 | MKIEELDDAECCREEEENLERQIVRVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDQIDEFLLLGAVPFPKDVPHLKNLGVGGVITLNEPYETLVPSSLYRAHGIDHLVIPTRDYLFAPSFVDINRAVQFIHYNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQSYNNQRPSSLPHSPSGDTVQAVQCYNNQRPSPLPHSPSGDTVLITKDDLEGYHSTSDTSMELAIVPKVPKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC | 305 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa6g03830 | 305 | Coils | Coil | 9 | 29 | - | - | |
Vifa6g03830 | 305 | Pfam | Dual specificity phosphatase, catalytic domain | 84 | 203 | IPR000340 | GO:0008138|GO:0016311 | |
Vifa6g03830 | 305 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 60 | 207 | IPR020422 | GO:0006470|GO:0008138 | |
Vifa6g03830 | 305 | CDD | PTPMT1 | 60 | 204 | IPR044596 | GO:0004721 | |
Vifa6g03830 | 305 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 53 | 202 | IPR029021 | - | |
Vifa6g03830 | 305 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 128 | 196 | IPR000387 | GO:0016311|GO:0016791 | |
Vifa6g03830 | 305 | SMART | dsp_5 | 63 | 204 | IPR020422 | GO:0006470|GO:0008138 | |
Vifa6g03830 | 305 | PANTHER | PHOSPHATIDYLINOSITOL PHOSPHATASE | 1 | 283 | - | - | |
Vifa6g03830 | 305 | Gene3D | Protein tyrosine phosphatase superfamily | 60 | 206 | IPR029021 | - | |
Vifa6g03830 | 305 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 149 | 159 | IPR016130 | GO:0016311|GO:0016791 | |
Vifa6g03830 | 305 | FunFam | Dual specificity phosphatase domain protein | 60 | 207 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa6g03830 | Vifa-Chr6 | 1264376490 | 1264378225 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa6g03830 | 2 | 293 | Protein tyrosine phosphatase (PTP) family | AT2G35680 | 50.305 | 8.98e-101 | 297 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa6g03830 | - | - | gmx:100817410 | 497.664 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa6g03830 | 6 | 1264376490 | 1264378225 | Vifa6g03830 | 6 | 1264376490 | 1264378225 | ECH |