Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa6g03789 | ATGGGAAGAAGAAAGTGTTCACATTGTGGTAAGATGGGACATAATTGTAGGACATGTACATCCTTCACCACAAAACTTGTAGGACTTCGTCTCTTTGGTGTCCAACTATCCTCATTATCATCATCATCATCATCTAATACCATCATCAAGAAAAGCTTTAGCATGGACACTTTTCCTTCACCAACCTCTTCATCTTCTTCATTCTCTTCATCAACCATTCATGATAATCATCATAACAAGAAAGGAGTTCCGTGGACAGAAGAAGAGCACAGAATATTTCTTGTTGGATTAGAAAAGCTTGGAAAAGGAGATTGGAGAGGTATCTCTAAAGACTTCGTGATTACAAGAACTCCTACACAAGTTGCAAGTCATGCTCAAAAATATTTTCTCCGATTAGCATCTCTCAATAATAAGAAAAGACGTTCAAGTCTCTTTGACTTGATTGGAAGCAAGAACACCAAGAGAGAAGTTGCATCCCCTAGTGCTAATCAGCCCTCTCTAGCTGGCCCATTTCTTCTAGGCCCAATTAGGGTCACTTAA | 540 | 0.3926 | MGRRKCSHCGKMGHNCRTCTSFTTKLVGLRLFGVQLSSLSSSSSSNTIIKKSFSMDTFPSPTSSSSSFSSSTIHDNHHNKKGVPWTEEEHRIFLVGLEKLGKGDWRGISKDFVITRTPTQVASHAQKYFLRLASLNNKKRRSSLFDLIGSKNTKREVASPSANQPSLAGPFLLGPIRVT | 179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa6g03789 | 179 | ProSiteProfiles | Myb-like domain profile. | 77 | 129 | IPR001005 | - | |
Vifa6g03789 | 179 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 77 | 133 | IPR017930 | - | |
Vifa6g03789 | 179 | SMART | sant | 81 | 131 | IPR001005 | - | |
Vifa6g03789 | 179 | Gene3D | - | 83 | 135 | - | - | |
Vifa6g03789 | 179 | SUPERFAMILY | Homeodomain-like | 78 | 134 | IPR009057 | - | |
Vifa6g03789 | 179 | ProSiteProfiles | SANT domain profile. | 85 | 133 | IPR017884 | - | |
Vifa6g03789 | 179 | FunFam | transcription factor MYB1R1 | 83 | 134 | - | - | |
Vifa6g03789 | 179 | ProSiteProfiles | Zinc finger CCHC-type profile. | 4 | 21 | IPR001878 | GO:0003676|GO:0008270 | |
Vifa6g03789 | 179 | Pfam | Myb-like DNA-binding domain | 84 | 129 | IPR001005 | - | |
Vifa6g03789 | 179 | CDD | SANT | 84 | 129 | IPR001005 | - | |
Vifa6g03789 | 179 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 3 | 156 | - | - | |
Vifa6g03789 | 179 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 80 | 131 | IPR006447 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa6g03789 | Vifa-Chr6 | 1250295182 | 1250296064 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Vifa6g03789 | Myb_DNA-binding | 1.3e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa6g03789 | - | - | cam:101500241 | 182.185 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa6g03789 | 6 | 1250295182 | 1250296064 | Vifa6g03789 | 6 | 1250295182 | 1250296064 | ECH |