Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03787 ATGATTGCGATTCTCAAAGTTTTCATTCTCTGCGATCTACTTCTCTGTTATCCTTCATTCTCTTTCTCTCTCCTTGCGAATAACTCGGTGCCGGAGCCGGATTTTGTTTTACCGGAAACTAACCTAACCGCCGCTGGCAATGCCTCGCTTGCGGGATCAAAAGAGGATAGCCTCGCTAACATGATTGATCGGGCTCTCGAACGGGAGTTTCCCGAAAATGAACAGAACGAAGGTACCAATGATGCTGGTAGTTTCAACAACAGTGTTGCTGGACAGCAGGCTGTTTTAGAAACTGTTGCTAGAGTTAGGACCAAGAAAAATGAGAGCAAAGAAGAAAAGTCATTTCAGTTCCATGATGTTTTCAATTTGGACAATGAGAACCGTGTTGAGGAAACACCAACTTTAATTGATCGAAAGGACAATGTCTTTATCATATCCAATCCCAAGTCAAAGTATCCTGTTCTGCAATTGGACTTGAGATTGATATCAGATCTCGTGGTTGTCATTGTCTCTGCAACCTGTGGTGGCATAGCCTTTGCTTGTGCTGGACAACCGGTTATGACTGGATATCTATTAGCAGGATCCATCATTGGACCAGGAGGTTTGAGTTTTGTCAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATATTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCCACAACTAAGCTTCGAGTTGTTCGGGCAGTGGCTATTCTTGGAGGTCTGCTGCAAATTGTCTTATTTATGTGCTTGTGTGGAATAATTGCTTCGTTATGTGGTGGTAAATCATCTGAAGGAATATTTGTTGGTGCATTCCTATCTATGTCTTCAACAGCAGTGGTCTTGAAATTCTTAATGGAAAAGAACAGCGTCAATGCCCTTCATGGTCAGGTTATAATTGGAACTCTGATTCTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCACTGCTTCCTGTCTTGGGTGGAACATCAGGTGTTCTTCAGGGAGTAATATCCATGAGTAAATCGTTGTTGACCTTAATTGCATTTTTGGTCGTTTTGTCAATATTATCTCGTACTTGCGTACCCTGGTTCCTTAAGCTTATGATAAGCTTGTCATCTCAGACCAATGAGCTTTATCAGTTAGCATCAGTGGCGTTCTGTCTAATGGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGCCTTGAACTAGGTTCATTTGCCGCGGGAGTAATGATATCAACAACGGATCTTGGTCAACATACGCTTGAACAAGTTGAGCCAATTCGCAACTTGTTTGCTGCTCTGTTCTTGGCCAGTATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCATCTGTCATATTGGTGATCATTGTAAAAACAATTGTAGCCGCATCTGTTGTCAAGGGGTTTGGATACAACAACAAGACTTCCATTCTTGTTGGGATGTCCTTGGCACAAATTGGGGAATTTGCATTTGTTCTTCTCAGTCGTGCTTCGAATGTTCATTTAGTTGAGGGAAAGTTGTATTTATTGCTCCTTGGAACAACAGCTCTCAGTCTGGTGACTACACCCTTGCTTTTCAGGCTGATTCCTGCTGTTCTACATCTTGGTGCATTGCTCCGGTGGTTCCCTCCTGATACTCCTGCTGAGGTTGTCTTCAAAGGGGACAGCTTTCGTGCAGACAGTACTAAGCGTATTACTTTGATGGTTCAAGGCTCCCATGATTCATGA 1752 0.4275 MIAILKVFILCDLLLCYPSFSFSLLANNSVPEPDFVLPETNLTAAGNASLAGSKEDSLANMIDRALEREFPENEQNEGTNDAGSFNNSVAGQQAVLETVARVRTKKNESKEEKSFQFHDVFNLDNENRVEETPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQIVLFMCLCGIIASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMEKNSVNALHGQVIIGTLILQDCAVGLLFALLPVLGGTSGVLQGVISMSKSLLTLIAFLVVLSILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLMVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNLFAALFLASIGMLIHVHFLWNHVDILLASVILVIIVKTIVAASVVKGFGYNNKTSILVGMSLAQIGEFAFVLLSRASNVHLVEGKLYLLLLGTTALSLVTTPLLFRLIPAVLHLGALLRWFPPDTPAEVVFKGDSFRADSTKRITLMVQGSHDS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03787 583 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 38 574 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vifa6g03787 583 Pfam Sodium/hydrogen exchanger family 166 534 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa6g03787 583 Gene3D - 159 542 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03787 Vifa-Chr6 1249857563 1249874219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03787 47 583 Antiporters AT2G19600 83.148 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03787 K26735 - gmx:100788884 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03787 6 1249857563 1249874219 Vifa6g03787 6 1249857563 1249874219 ECH