Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03754 ATGGAGCATAATTTCTATCTCTCCCTTCTTCTTCTCTTTGTCTCTTTCATCTCCCTCTCACTTTTCTTCCTCTTCAACAAAAACAAATCTCTATGGAACTTACCACCGGGGGAAATGGGCTACCCGGTGATCGGAGAAAGTCTCGAGTTTTTATCGACGGGGTGGAAAGGACATCCTGAAAAATTCATTTTCGACCGAATGACTAAATATTCATCTGAACTATTTAAAACATCAATCCTAGGTGAATCTACTGTGGTTTGTTGTGGAGCCGCATGTAACAAGTTTTTGTTTTCAAACGAGAATCAAACAGTTGTGACATGGTGGCCAGATAGTGTGAACAAAATATTTCCTACTAGTGTTTCATTTGGATCAAATTCTAAGGAAGAGGCTGTGAAGATGAGAAAAATGCTTCCTCAGTTTTTTAAACCAGAAGCTTTACAACGTTATGTTGGTATTATGGATACTATTGCTCAAAGACACTTTGTTTCTCTTTGGGAGAATAAAGATCAAGTCACTGTGTATCCATTGGCTAAGAGGTATACTTTTTTGTTGGCATGTCGATTATTCTTGAGCGTTGAAGACGAGAATCATGTAGCAAAATTTAGCGATCCGTTTCAATTAATAGCGGCCGGAGTCATATCCTTACCGCTCAATTTGCCCGGAACCCCGTTTAACAAAGCTATAAAGGCCTCAAACATCATTAGAAAGGAGTTGTTGAAGATCATAAAGCAAAGGAGAATGGATTTGGAACAAGGTGTTGCATCACCAACACAAGACATTTTGTCTCACATGTTGTTGGCATGTGATGAAAATGGAGAGCATATGAATGAACTTAATATTGCTGATAAGATTCTAGGGCTTTTCGTAGGAGGACATGACACTGCTAGCGTCGCATGCACTTTCCTCGTCAAATATCTCGCCGAGTTACCTCACATTTACGATAAAGTCTATCAAGAGCAAATGGAAATTGCAAATTCGAAACCCCCAGGAGAGTTGTTGAATTGGGATGACCTCAAGAAAATGAGATACTCTTGGAATGTAGCTTGTGAAGTATTGAGAGTTGCACCTCCACTCCAAGGAGGTTTCAGAAAAGCCATCACTGACTTTATGTTCAATGGCTTCTCAATTCCTAAGGGATGGAAGCTCTATTGGTGTGTGAGTTCAACACATCTAAATCCAGAATGTTTTCCCAAGCCAGAGGAATTTGACCCAACAAGGTATGAAGGAAATGGGCCAGCTCCTTACACTTTTGTGCCATTTGGTGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCAAGATTAGAAATTCTAGTTTTCATGCACAATTTAGTGAAAAGGTTCAAGTGGGAAAACATGATTCCAGATGAGAAAATTGTTGTTGATCCCTTCCCTATCCCTGCCAATAATCTCCCAATTCGTCTCTTTCCACATAAAGCTTGA 1443 0.4019 MEHNFYLSLLLLFVSFISLSLFFLFNKNKSLWNLPPGEMGYPVIGESLEFLSTGWKGHPEKFIFDRMTKYSSELFKTSILGESTVVCCGAACNKFLFSNENQTVVTWWPDSVNKIFPTSVSFGSNSKEEAVKMRKMLPQFFKPEALQRYVGIMDTIAQRHFVSLWENKDQVTVYPLAKRYTFLLACRLFLSVEDENHVAKFSDPFQLIAAGVISLPLNLPGTPFNKAIKASNIIRKELLKIIKQRRMDLEQGVASPTQDILSHMLLACDENGEHMNELNIADKILGLFVGGHDTASVACTFLVKYLAELPHIYDKVYQEQMEIANSKPPGELLNWDDLKKMRYSWNVACEVLRVAPPLQGGFRKAITDFMFNGFSIPKGWKLYWCVSSTHLNPECFPKPEEFDPTRYEGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWENMIPDEKIVVDPFPIPANNLPIRLFPHKA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03754 480 FunFam Taxadiene 5-alpha hydroxylase 25 478 - -
Vifa6g03754 480 CDD CYP90-like 66 477 - -
Vifa6g03754 480 PANTHER CYTOCHROME P450 26 31 466 - -
Vifa6g03754 480 SUPERFAMILY Cytochrome P450 29 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 Gene3D Cytochrome P450 25 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 Pfam Cytochrome P450 35 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03754 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03754 Vifa-Chr6 1237178643 1237181104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03754 33 382 Cytochrome P450 AT5G36110 57.224 1.10e-142 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03754 K20667 - ag:CBN88269 834.713