Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03713 ATGCCAAGTGTGGCCGTAAAACTCTACAGTGTATTCTTCAAGTTCCTCTTGAAGCACCGTTTACAAAACCGGATTCAAGCCCAACCCGACAATAACTCCAACTCGTTTGGTATCACTTCACGACCCGAAGAATCCGTCGCTAACTCTAACCCTTCTTTTACCGACGGCGTCGCCACCAAGGATATCCACATCGATCCTTTCACTTCTCTCTCTATCCGAATCTTTCTTCCTCACTCCGCTCTTTCTCCTCCCGAGCCTCATTCCAAACCTAACTCCAAACCTAAACAACAAGCTCCCGAACCTGGATCTGTACGGAGAAGTAGCTATCGTCCTCCGTTCAGGGAAGAGCAGCTCCGAGGAATGAATAGTAACGCTGTTGAGGGTTTGAATTTGATGGGCGCTGGTGTTGAAACTGGTGCTGGTTTGTACCGTGGTTACTCGCCGGCGTTGGATAATCGGCGGAGGAAATTACCGGTGATGTTGCAGTTTCATGGTGGGGGGTGGGTTAGTGGTAGTAATGATTCGGTGGCGAACTATTTGTTTTGTCGACGGATCGCCAAGCTTTGTGATGTGATTGTCGTTGCGGTTGGGTATAGGTTGGCGCCGGAGAGTAGGTATCCGGCTGCGTTTGATGATGGGTTGAAGGTGTTGAATTGGTTGGCCAAGCAGGCGAATTTGGCCGAGTGTAGTAAATCTATGGGGGTTGGTGGTGGTGGTGGTGGGGAGTTTAACAAGGATAATCATAGGCATATTGTTGATTCTTTTGGTGCTTTAGTGGTGGAGCCTTGGTTGGCTAGTCATGGAGATCCAACAAGGTGCAAGCCATACATAGCTATGATTTGTCTTCAATTTGGTTTTGCTGCTATTGCTCCATTCGCTATAGTTCTTGAGAGGAAGATAAGGCCAAGGATTACGTTTCTTATGTTCATGCAAATGTTTGTATTGGGACTCCTCGGGCCTGTGATTGATCAGAATCTATACTATGCTGGGTTGAAATTCACATCTCCAACATACTCTTATGCTATTAGCAATATTCTCCCTGCAATGACTTTTGTAATGGCTGTTATTTTCAGAATATTCACATCAGGTCTTACATATTATGTACAAGGAATTGTGATGCAAAAGAAAGGACCGGTTTTTGTGACTGCTTTTAGTCCTTTGATGATGATCATTGTAGCAACCATGGCCACTTTCATCCTTGCTGAAAAATTATATCTTGGAGGTGTTATTGGAGCAATTTTGATCGTAATAGGACTTTACTCCGTTCTATGGGGCAAAAACAAAGAAAACAAAGAGATTGAAGCGGAAACAAAAACAGAAAGAACGGAGTGTTGTGTAAAAATTTGGAGGCTTGTTATGTTAAAGGTAATTGGGTCTTCTTTTAGGATGAGTATATATCAGTATACTGATTATTTAGTTGTCTACCGGAGATTTTATATTGGTAATTTAAGTTTGGAAACTTATAAATAG 1470 0.432 MPSVAVKLYSVFFKFLLKHRLQNRIQAQPDNNSNSFGITSRPEESVANSNPSFTDGVATKDIHIDPFTSLSIRIFLPHSALSPPEPHSKPNSKPKQQAPEPGSVRRSSYRPPFREEQLRGMNSNAVEGLNLMGAGVETGAGLYRGYSPALDNRRRKLPVMLQFHGGGWVSGSNDSVANYLFCRRIAKLCDVIVVAVGYRLAPESRYPAAFDDGLKVLNWLAKQANLAECSKSMGVGGGGGGEFNKDNHRHIVDSFGALVVEPWLASHGDPTRCKPYIAMICLQFGFAAIAPFAIVLERKIRPRITFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSYAISNILPAMTFVMAVIFRIFTSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVATMATFILAEKLYLGGVIGAILIVIGLYSVLWGKNKENKEIEAETKTERTECCVKIWRLVMLKVIGSSFRMSIYQYTDYLVVYRRFYIGNLSLETYK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03713 489 Pfam alpha/beta hydrolase fold 160 241 IPR013094 GO:0016787
Vifa6g03713 489 PANTHER WAT1-RELATED PROTEIN 358 435 IPR030184 GO:0016020|GO:0022857
Vifa6g03713 489 MobiDBLite consensus disorder prediction 27 52 - -
Vifa6g03713 489 SUPERFAMILY Multidrug resistance efflux transporter EmrE 355 428 - -
Vifa6g03713 489 Gene3D alpha/beta hydrolase 6 252 IPR029058 -
Vifa6g03713 489 MobiDBLite consensus disorder prediction 80 121 - -
Vifa6g03713 489 SUPERFAMILY alpha/beta-Hydrolases 143 297 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03713 Vifa-Chr6 1219123807 1219127418 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03713 1 273 Carbohydrate Esterase AT3G27320 61.372 1.45e-106 322