Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03661 ATGGAGAATGAATGTAACTGGGAGCAAAACACACTCATCAATGAACTAATTCAAGGGATGGATGTCGCGAAGAGATTGAAGGAAGAGTTGAGAACACCATATTCCATTGACACGAGGGAGTTGCAGATGCAGATGATACTATCTTCTTACGAAAAGGCTCTGCGAATTCTAAGAAGTAATGAATCAACTTCTAAGTCACAGACTGTGAGTCCAGTCATAACTTCGTTACCTCAGTCCCCGGTGTCTACCAATGGGAGTCCGCTGAGCGAGGACTTTGATGCGACCTTTCAAGATCGCAAAGAAGTTAAAAACAAATCAAAGAAAAGAAAGGTTGGGCCCAAATGCATTGATCAGATAAGAGTGAGCTGTGAAAGTGGCCTTGAAGGACCGCACGAAGACGGCTTCAACTGGAGAAAATATGGTCAAAAAGATATCCTTAGTGCTAAACATCCAAGAAGCTACTATCGGTGCACCTTCCGCAACACACAGAACTGTTGGGCGACGAAGCAAGTGCAGAGATCAGATGAAGATCCGACAATATTTGACATAACTTACAGAGGAAAACATACATGTTCTCAGGGAAACAATGCCATTGTGCCATACAAGCCACAAGAGATTAACAATGCCATTGTGCCATACAAGCCACAAGCGACTAACAATGCCATTGTGCCATACAAGCCACACAATCAAAATAATGATATTCACCAGGCACGACAATCACAAGAGCGCTTTTCAAACTTCAGCAACACCTTGAATGTGCAAACGGAGAACCTTGGAAACCAAGAAATGGCACGTCCTTTCACCTTCCCTTCCACTTCATTTGGATACACAGCGCAAGAAAACCAAAGCTGGGTTCCCTCAACTTTAGAGAACGATTCATTCTTGAGCAGCCTGTTCCAAACACACTTGTTATCTCCAACAACACCAGAATCAAACTATTTCTCATCTCCAACTTTCAACATGAACGATTTTGATGGGTTCTATAGCATGCCTCTTTCAGAATCCGATATTCCGGATATCATTTCCACCAACACGTCAGTCACAAATTCTCCAATTCCCAATTTTAATTTTCCACTTGATCCAGTGGAAATTGATCCAAACTTCCCGTTCAATACTCCGGGATTTTTCTCGTAA 1134 0.425 MENECNWEQNTLINELIQGMDVAKRLKEELRTPYSIDTRELQMQMILSSYEKALRILRSNESTSKSQTVSPVITSLPQSPVSTNGSPLSEDFDATFQDRKEVKNKSKKRKVGPKCIDQIRVSCESGLEGPHEDGFNWRKYGQKDILSAKHPRSYYRCTFRNTQNCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAIVPYKPQEINNAIVPYKPQATNNAIVPYKPHNQNNDIHQARQSQERFSNFSNTLNVQTENLGNQEMARPFTFPSTSFGYTAQENQSWVPSTLENDSFLSSLFQTHLLSPTTPESNYFSSPTFNMNDFDGFYSMPLSESDIPDIISTNTSVTNSPIPNFNFPLDPVEIDPNFPFNTPGFFS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03661 377 FunFam WRKY transcription factor 53 117 194 - -
Vifa6g03661 377 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa6g03661 377 Gene3D WRKY domain 116 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa6g03661 377 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 295 IPR044810 GO:0003700
Vifa6g03661 377 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa6g03661 377 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa6g03661 377 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa6g03661 377 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03661 Vifa-Chr6 1203996242 1203997570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03661 6 369 WRKY Transcription Factor Family AT4G11070 37.500 1.14e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifa6g03661 WRKY 4.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03661 - - gmx:100815760 501.13