Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03645 ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCCAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAATTTTGGTTTTCCACCAAATTTCAACCAGACATCCTCTGTTCCAAACTTTCAAACATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATTGTTTCTAATGAAGTCGGTCCGAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTTCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAATATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGATAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAAGAATTATATGCATGTGGGAAGAATGTTAAATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGGTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCCAGTGCTCGTCCTATAGGAAGGGAGGCAGCTAAAAAAAAGGGTAAAAAGAAAAGCAAGGAATATGCCTCGGAGGTGGTGGACAAAGAATGGGCTGAATACAAAGAATTCAAGACGAAAGAGCTTGAACGATTGGACAACATAGCGTTGATGCAACAACAGGCTAACAATATAGCCTTGGAGAAGACTAAAACCAAGAAAATGAAGATGTATCTAAAGCTAACTTCCGAAGAGCATCTAGATGACCGGAAGAACCAGCTGTTGAAAAAGTTGGAGGCAGAACTGTTTGATAATTAA 1164 0.3978 MDPNNHFNTQNSANFPFNQNPNNFPNPNNYQNPNYYQNPNQFSNQHPQNIPNFGFPPNFNQTSSVPNFQTYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMIVSNEVGPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKVLDKWIGAYDGAKRMQGSGWSENDVLAKAQELYACGKNVKFTLMEEWHALRDQPRYGSQVGGNIGSGSSGSKRSRESDACGSNTVESSARPIGREAAKKKGKKKSKEYASEVVDKEWAEYKEFKTKELERLDNIALMQQQANNIALEKTKTKKMKMYLKLTSEEHLDDRKNQLLKKLEAELFDN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03645 387 MobiDBLite consensus disorder prediction 122 141 - -
Vifa6g03645 387 MobiDBLite consensus disorder prediction 119 141 - -
Vifa6g03645 387 MobiDBLite consensus disorder prediction 258 308 - -
Vifa6g03645 387 PANTHER - 112 384 - -
Vifa6g03645 387 MobiDBLite consensus disorder prediction 1 27 - -
Vifa6g03645 387 MobiDBLite consensus disorder prediction 262 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03645 Vifa-Chr6 1200983837 1200985000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03645 85 367 Glutathione S-transferase Gene Family AT5G41240 27.451 8.23e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03645 - - tpra:123885584 473.011