Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03636 ATGAGATTAAACTTGTTATCCGGTCGTAATCCAGGCTTTGCAATACCTCACTTCTTATCTAGTCGAAATCCAGGCTTCAGAATAAATCAAGTGGTTATCCGGTCGCGTTCGGGCTTTAACTTGAATTTAGGGCACACTAATATCCGGCCGACTCCGGGCTTCTTAATAACTGTCCATGTAAACTGCTATTTGGTCGGAATCCAAGCTTCACAGTGCCTTGCACCGCTATCTGGTCGTAATCCAGGATTCACAATGTGTTATACCATTATCTGGTTGAATCCAGGTTTCATGGTGTCATGTACTGCTATCTGGTCGAATCCAAACTTCACAATACCTCACTTATTATCTGGTCAAAATCCAGGCTTCAGAATAAATCAAGTGGTTATCCGGTCGCATCCGGGCTTCAACTTGAATTTAGGGCACACTAATATCCGGCCGACTCCGGGCTTCTTAGTAACTGTCCATGTAAACTGCTATTTGGTCGGAATCCAAGCTTCACAGTTCCTTGTACCTCTATCTGGTCGTAATCCAGGCTTCACGATGTGTTATACCATTATCTGGTCGAATCCAGGCTTCATGGTGTCACGTACTACTATCTGGTCGAATCCAATCTTCACAATACCTCACTTCTTATTTGGTCGAAATCCAGGCTTCAGAACAAATCAAGTTGTTATCCGGTCGCATCCGGGCTTCCCTTTGACTGTTGGGTTTACTAGTATCCGGTCGAATCTGGGCTTCACAGTAACTGGCTGGGTAAACTGTTATTTGGTCATAATCCAAGCTTCACAGTGTCCCTTAACGCTATCTGGTCGTAATCCAGGCTTCACGATCTTTGTTGGGGATTTTAATGATGAACTCCGCTGGGGATGGATTACCGTTGCTGGTGATATTGAATCTGCTGAACTCCTATTTGGGGAAAGAAAGAACTTTGCTGGGGATGATCTTTCAGTTGGTAAGCTTCCAGAGTTTACTGGGGACGATGACTCAGCTCTGTTGGGGAAGCTTTTTAGACTGCGCTGGGGAAATGGCTCCACTGGGGGTATCTTAGACAGGTCTGAATCAAGAGCATCAGGTGTCGCGCCTCAATTAAGAAACAAGAAGCATGAGAAAAGAGAGGAACATAAAGTAGAAAAAGTCAGATTCAAGTTTACCTTAGCAGACCTCACGTCGAATTGCAACTGGAGAAACCTTCTCTCCAACGATGCTTGTAAGGCCGTTAGAGTGTTAGAAAACCAAAAAAATCACAAAGACAAACCAGTTCGCCGCAAGGAAGAAAAACCGGAAGAACCAGAATTGCCGAAATACAGAGATCGAGCTAAGGAACGTAGAGAAGATCAAAATCCTGATTATGAACAAACTGAACTTGGGTTTCATGCTGTTGCTCCTCCTGGTACCGTTGATATTACGTCATCTGATGCGTATAAGTTATCGATTGAGAAGAGCAAGTACCTTGGAGGTGATGTGGAGCATACACATTTGGTTAAAGGTTTGGATTATGCTTTACTGAACAAAGTAAGGAGTGAAATTAAGAAGCCAGATCTGAGGAAAAAGGTTTTGCCTGCTGTCATCGTTCGTCAACGTAAGCCATGGCGCCGAAAGGACGGTGTCTTCAAGTACTTTGAAGATAACGCTGGTGTCATTGTGAATCCTAAGGGAGAAATGAAAGGTTCTGCTATTACTGGTCCTATTGGTAAGGAGTGTGCTGATCTATGGCCTAGAATCGCAAGTGTTAGAACAATATACTCTGATTGA 1752 0.4384 MRLNLLSGRNPGFAIPHFLSSRNPGFRINQVVIRSRSGFNLNLGHTNIRPTPGFLITVHVNCYLVGIQASQCLAPLSGRNPGFTMCYTIIWLNPGFMVSCTAIWSNPNFTIPHLLSGQNPGFRINQVVIRSHPGFNLNLGHTNIRPTPGFLVTVHVNCYLVGIQASQFLVPLSGRNPGFTMCYTIIWSNPGFMVSRTTIWSNPIFTIPHFLFGRNPGFRTNQVVIRSHPGFPLTVGFTSIRSNLGFTVTGWVNCYLVIIQASQCPLTLSGRNPGFTIFVGDFNDELRWGWITVAGDIESAELLFGERKNFAGDDLSVGKLPEFTGDDDSALLGKLFRLRWGNGSTGGILDRSESRASGVAPQLRNKKHEKREEHKVEKVRFKFTLADLTSNCNWRNLLSNDACKAVRVLENQKNHKDKPVRRKEEKPEEPELPKYRDRAKERREDQNPDYEQTELGFHAVAPPGTVDITSSDAYKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIKKPDLRKKVLPAVIVRQRKPWRRKDGVFKYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASVRTIYSD 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03636 583 ProSitePatterns Ribosomal protein L14 signature. 521 547 IPR019972 -
Vifa6g03636 583 MobiDBLite consensus disorder prediction 351 371 - -
Vifa6g03636 583 SUPERFAMILY Ribosomal protein L14 511 577 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vifa6g03636 583 Pfam Ribosomal protein L14p/L23e 506 577 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vifa6g03636 583 SMART Ribosomal_L14_2 477 582 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vifa6g03636 583 Gene3D Ribosomal protein L14 493 580 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vifa6g03636 583 MobiDBLite consensus disorder prediction 413 453 - -
Vifa6g03636 583 PANTHER RED PROTEIN IK FACTOR CYTOKINE IK 391 511 IPR039896 -
Vifa6g03636 583 MobiDBLite consensus disorder prediction 413 451 - -
Vifa6g03636 583 Pfam RED-like protein N-terminal region 413 513 IPR012916 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03636 Vifa-Chr6 1198334083 1198338634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03636 511 576 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 98.485 3.82e-41 143