Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03633 ATGAACGACGAAGACGTCTCCCGTCAAATCCACCAGATGGTGAGGTTTATCCAACAAGAAGCCGAAGAAAAAGCGACCGAGATCTCTGCTTCTGCAGAAGAGGAATTCAATATCGAGAAGCTTCAGTTGGTTGAAGCCGAGAAGAAGAAGATCAGACAGGAATATGAACGCAAAGAGCGCCAAGTTGAAATTCGAAAGAAAATTGAGTACTCGATGCAGCTGAATGCTTCTCGGATCAAAGTTCTTCAAGCTCAAGATGACATTGTTACTTCCATGAAAGAAGTTGCAGCTAAGGAACTTTTGAATGTGAGCCATCATCACCTTGTTGAGGATATCTTGCATGTGGGCCATCATGAGTACAGAAACCTTCTAAAAGATCTCATTGTTCAGAGTTTGCTAAGACTGAAAGAACCTTCTGTCTTGTTGAGATGTCGGAAACGTGACGTGCACATGGTAGAACATGTGCTGGAAGCAGCTGCAGAGGAGTATGCTGTAAAAGCAGGTGTTGTTCCTCCAGAGATCATTGTTGACCATGATGTCTATCTTCCACCTGCACCCAAGCATCACAATACTCACGCCCCCTACTGCTCTGGTGGGGTGGTGTTGGCTTCTCGTGATGGAAAGATTGTGTGTGAAAATACTCTTGATGCACGGCTGGATGTAGTGTTCCGCAAAAAGCTTCCAGAGATCCGAAAACAGCTATTTGGAAAAGTTGCTGTTTGA 723 0.4467 MNDEDVSRQIHQMVRFIQQEAEEKATEISASAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKIEYSMQLNASRIKVLQAQDDIVTSMKEVAAKELLNVSHHHLVEDILHVGHHEYRNLLKDLIVQSLLRLKEPSVLLRCRKRDVHMVEHVLEAAAEEYAVKAGVVPPEIIVDHDVYLPPAPKHHNTHAPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGKVAV 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03633 240 SUPERFAMILY V-type ATPase subunit E-like 107 236 - -
Vifa6g03633 240 Gene3D - 1 62 - -
Vifa6g03633 240 Gene3D - 94 239 IPR038495 -
Vifa6g03633 240 Pfam ATP synthase (E/31 kDa) subunit 16 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vifa6g03633 240 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 237 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vifa6g03633 240 Hamap V-type proton ATPase subunit E [atpE]. 8 236 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vifa6g03633 240 Coils Coil 29 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03633 Vifa-Chr6 1197207903 1197211234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03633 1 239 Primary Pumps ATPases(2) AT4G11150 71.548 7.03e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03633 K02150 - gmx:100500452 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03633 6 1197207903 1197211234 Vifa6g03633 6 1197207903 1197211234 ECH