Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03621 ATGAGCTCAAGCGAATCGAATAGACAACGAAGTTCATCTTCAACGGTGGAATCCAAACCTCAATGTAAAGCACTTTTATTTTTGGCATACCAGAGTTTGGGCTTTCTGTTTGGTGATATCAGCCTCTCCCCTCTTTATGTCTATCAAAGTATATTTTCTGGGAGACTGATACATGTTCAAAATGAGGATGCAATATTTGGCGCATTTTCTTTGATTTTTTGGACTCTCTCTGTTATTTCTCTGTTGAAGTATGCTATTTTCATGTTGAGTGCAGATGATAATGGCGAAGGAGGGATTGTTGCTTTGTATTCTCACCTTTGCAAAAATGCAAAATTTTGTTTGCTTCCTAATCATCAAACATCTGATGAAGAGCTATCTACATATCGCAAGCCTGGTTACTCAAATAGAAATATACCACCCTCATATTTGAAAAAATTCATTGAAAAACATAAGAGCACAAAAATTGTTTTGCTTGTTTTTGTTTTACTTGGTGCTTGCATGGTAATTTGTGTTGGTGCACTCATGCCTGCCGTTTCAGTTCTTTCATCTGTTGAAGGGTTGAAAATCGAAGCGAAGATTAAAAATAATAATATGGTGCCTTTTATTTCCTGTGTTCTACTGGTTGGACTCTTTGTTCTGCAACACCGTGGCTCCCACGCGATTGCTTTCATGTTTCCCCCCATAATCATCCTATGGTTACTATCTATTTTCACGATTGGCATTTACAATGTCATCAAGTGGAATCCAAGCATATATCGGGCTCTTTCTCCATATTATATATATAAGTTCTTTTGGGTTACAGGAAAAGGTGGTTGGACTAATCTTGGAGGGGTATTTTTGTGTGTTACAGGAAGTGAAGCTATGTTTACAGACCTTGGGTACTACAAACAAGCACCTGTAAGGGCTGCTTTTCTTTCAAAGAATTTATCTGCAGTCCCTATAAGCTTTTATGCTTCTATTCCAGATGTCCTCTTTTGGCCAGTATTTGCGTTGGCTGCTTTGGCTGCAATAGTTGCAAGTCAGGCTGTCATCTCTTCGACATACTCAATTGTCCAACAATGCCATGCATTTGAATGTTTCCCTCGTGTTAAGGCAATACAATCCAGAAGATGGATCAACGGTCAGACGTATATACCAGAGATAAACTGGATTCTTATGGTAATCAGCCTGGCTGTGACAGTTGGATTTGGAGACACAGGCCGTATAGTATATGCTTATGGGATTGCATGTCTGATTGTGTCATTTGTGACTACATGTTTGACATTACTCGTCATCAACCTTGTATGGCATCAAAGTCTCATAGTTGCTATGGCATTTCTCTTATTCTTTGGTTCAATAGAAGTCCTCTTTCTCTCCTCTTATTGTGTGAAAATCCCAATAGGTGGCTGGGTTCCAATTGTGCTCTCCTCCCTCTTCATGGTTGTTATGTATGTGTGGCATTATGGTTCTAGAAAAAAGTATTTCTTTGATATGCATAACAAAGTTTCAATGAGGGGGGTCCTTGCATTGGGTCCTAGTCTTGGGATTGTAAGGGTTCCTGGGATGGGCCTTATCTATACTGAATTAGCGTCTGGAGTCCCTGCCAGTTTCACTCATTTCTTGACAAATCTGCCAGCTTTCTACCAAGTTGTTGTTTTTGTTTGTGTTAAGACTGTCCTTGTGCCTTCTGTGCCCCATGCAGAACGTTATCTCATTGGTCGAATTGGTCCGAAATCCTATCGGTTGTATCGGTGCATTGTTCGACATGGTTACAAAGATGTTTATAGCCATGAAAATGATTTTGAAAATGAACTGGTGATGAGCATAGCAGAATTCATTCAACTGGAAGCTGAAGGTTGCTCTGGAAACCTAGATGGTACTGCAGATGGCCGAATGGCAGTCGTTAGGACGTCTGGGAAGTTTGGAACAAGATTGCGAATGTCAGAATCTGCTGGTGTGGAAGAAGGCGACAGTAATAATCTTCCCGGAGCTTTGACTGTTACTAGCAGTAAATCTCCGACATTGAAGAAGCTGCATGCCATGTATGAGCAGGAATCACTTGAACTCAACACTAGACGGCGGATTAAATTTGAGCTTCTAAATACAATATATAGAGATCCACTAGTAAAGGAGGAGCTCATGGAACTTGTGGAAGCCAACCGCGCAGGAGCAGCATATGTAATAGGCCATTCTCATGTAAAGGCCAAGTGGAATTCTTCCTTTATGAAGAAGTTTGCTATAAACCTCTACTCTTTTCTTCGGAAAAACTGCCGCTCCCCTGCTGTTGGACTAAATATTCCCCAGACTTGTCTGATTAAGGTAGGAATGAATTACCATGTCTAG 2322 0.4057 MSSSESNRQRSSSSTVESKPQCKALLFLAYQSLGFLFGDISLSPLYVYQSIFSGRLIHVQNEDAIFGAFSLIFWTLSVISLLKYAIFMLSADDNGEGGIVALYSHLCKNAKFCLLPNHQTSDEELSTYRKPGYSNRNIPPSYLKKFIEKHKSTKIVLLVFVLLGACMVICVGALMPAVSVLSSVEGLKIEAKIKNNNMVPFISCVLLVGLFVLQHRGSHAIAFMFPPIIILWLLSIFTIGIYNVIKWNPSIYRALSPYYIYKFFWVTGKGGWTNLGGVFLCVTGSEAMFTDLGYYKQAPVRAAFLSKNLSAVPISFYASIPDVLFWPVFALAALAAIVASQAVISSTYSIVQQCHAFECFPRVKAIQSRRWINGQTYIPEINWILMVISLAVTVGFGDTGRIVYAYGIACLIVSFVTTCLTLLVINLVWHQSLIVAMAFLLFFGSIEVLFLSSYCVKIPIGGWVPIVLSSLFMVVMYVWHYGSRKKYFFDMHNKVSMRGVLALGPSLGIVRVPGMGLIYTELASGVPASFTHFLTNLPAFYQVVVFVCVKTVLVPSVPHAERYLIGRIGPKSYRLYRCIVRHGYKDVYSHENDFENELVMSIAEFIQLEAEGCSGNLDGTADGRMAVVRTSGKFGTRLRMSESAGVEEGDSNNLPGALTVTSSKSPTLKKLHAMYEQESLELNTRRRIKFELLNTIYRDPLVKEELMELVEANRAGAAYVIGHSHVKAKWNSSFMKKFAINLYSFLRKNCRSPAVGLNIPQTCLIKVGMNYHV 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03621 773 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 772 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g03621 773 NCBIfam potassium uptake protein 28 773 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g03621 773 Pfam K+ potassium transporter 30 586 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03621 Vifa-Chr6 1192696670 1192704975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03621 17 773 Inorganic Solute Cotransporters AT4G23640 58.945 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03621 K03549 - gmx:100777998 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03621 6 1192696670 1192704975 Vifa6g03621 6 1192696670 1192704975 ECH