Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03620 ATGAGCTCAAGCGAATCGAATAGACAACGAAGTTCATCTTCAACGGTGGAATCCAAACCTCAATGTAAAGCACTTTTATTTTTGGCATACCAGAGTTTGGGCTTTCTGTTTGGTGATATCAGCCTCTCCCCTCTTTATGTCTATCAAAGTATATTTTCTGGGAGACTGATACATGTTCAAAATGAGGATGCAATATTTGGCGCATTTTCTTTGATTTTTTGGACTCTCTCTGTTATTTCTCTGTTGAAGTATGCTATTTTCATGTTGAGTGCAGATGATAATGGCGAAGGAGGGATTGTTGCTTTGTATTCTCACCTTTGCAAAAATGCAAAATTTTGTTTGCTTCCTAATCATCAAACATCTGATGAAGAGCTATCTACATATCGCAAGCCTGGTTACTCAAATAGAAATATACCACCCTCATATTTGAAAAAATTCATTGAAAAACATAAGAGCACAAAAATTGTTTTGCTTGTTTTTGTTTTACTTGGTGCTTGCATGGTAATTTGTGTTGGTGCACTCATGCCTGCCGTTTCAGTTCTTTCATCTGTTGAAGGGTTGAAAATCGAAGCGAAGATTAAAAATAATAATATGGTGCCTTTTATTTCCTGTGTTCTACTGGTTGGACTCTTTGTTCTGCAACACCGTGGCTCCCACGCGATTGCTTTCATGTTTCCCCCCATAATCATCCTATGGTTACTATCTATTTTCACGATTGGCATTTACAATGTCATCAAGTGGAATCCAAGCATATATCGGGCTCTTTCTCCATATTATATATATAAGTTCTTTTGGGTTACAGGAAAAGGTGGTTGGACTAATCTTGGAGGGGTATTTTTGTGTGTTACAGGAAGTGAAGCTATGTTTACAGACCTTGGGTACTACAAACAAGCACCTGTAAGGGCTGCATTTTCTTGTATCATTTACTCATGTCTAATTCTTCAGTACATGGGGCAGGCTGCTTTTCTTTCAAAGAATTTATCTGCAGTCCCTATAAGCTTTTATGCTTCTATTCCAGATGTCCTCTTTTGGCCAGTATTTGCGTTGGCTGCTTTGGCTGCAATAGTTGCAAGTCAGGCTGTCATCTCTTCGACATACTCAATTGTCCAACAATGCCATGCATTTGAATGTTTCCCTCGTGTTAAGGCAATACAATCCAGAAGATGGATCAACGGTCAGACGTATATACCAGAGATAAACTGGATTCTTATGGTAATCAGCCTGGCTGTGACAGTTGGATTTGGAGACACAGGCCGTATAGTATATGCTTATGGGATTGCATGTCTGATTGTGTCATTTGTGACTACATGTTTGACATTACTCGTCATCAACCTTGTATGGCATCAAAGTCTCATAGTTGCTATGGCATTTCTCTTATTCTTTGGTTCAATAGAAGTCCTCTTTCTCTCCTCTTATTGTGTGAAAATCCCAATAGGTGGCTGGGTTCCAATTGTGCTCTCCTCCCTCTTCATGGTTGTTATGTATGTGTGGCATTATGGTTCTAGAAAAAAGTATTTCTTTGATATGCATAACAAAGTTTCAATGAGGGGGGTCCTTGCATTGGGTCCTAGTCTTGGGATTGTAAGGGTTCCTGGGATGGGCCTTATCTATACTGAATTAGCGTCTGGAGTCCCTGCCAGTTTCACTCATTTCTTGACAAATCTGCCAGCTTTCTACCAAGTTGTTGTTTTTGTTTGTGTTAAGACTGTCCTTGTGCCTTCTGTGCCCCATGCAGAACGTTATCTCATTGGTCGAATTGGTCCGAAATCCTATCGGTTGTATCGGTGCATTGTTCGACATGGTTACAAAGATGTTTATAGCCATGAAAATGATTTTGAAAATGAACTGGTGATGAGCATAGCAGAATTCATTCAACTGGAAGCTGAAGGTTGCTCTGGAAACCTAGATGGTACTGCAGATGGCCGAATGGCAGTCGTTAGGACGTCTGGGAAGTTTGGAACAAGATTGCGAATGTCAGAATCTGCTGGTGTGGAAGAAGGCGACAGTAATAATCTTCCCGGAGCTTTGACTGTTACTAGCAGTAAATCTCCGACATTGAAGAAGCTGCATGCCATGTATGAGCAGGAATCACTTGAACTCAACACTAGACGGCGGATTAAATTTGAGCTTCTAAATACAATATATAGAGATCCACTAGTAAAGGAGGAGCTCATGGAACTTGTGGAAGCCAACCGCGCAGGAGCAGCATATGTAATAGGCCATTCTCATGTAAAGGCCAAGTGGAATTCTTCCTTTATGAAGAAGTTTGCTATAAACCTCTACTCTTTTCTTCGGAAAAACTGCCGCTCCCCTGCTGTTGGACTAAATATTCCCCAGACTTGTCTGATTAAGGTAGGAATGAATTACCATGTCTAG 2376 0.4053 MSSSESNRQRSSSSTVESKPQCKALLFLAYQSLGFLFGDISLSPLYVYQSIFSGRLIHVQNEDAIFGAFSLIFWTLSVISLLKYAIFMLSADDNGEGGIVALYSHLCKNAKFCLLPNHQTSDEELSTYRKPGYSNRNIPPSYLKKFIEKHKSTKIVLLVFVLLGACMVICVGALMPAVSVLSSVEGLKIEAKIKNNNMVPFISCVLLVGLFVLQHRGSHAIAFMFPPIIILWLLSIFTIGIYNVIKWNPSIYRALSPYYIYKFFWVTGKGGWTNLGGVFLCVTGSEAMFTDLGYYKQAPVRAAFSCIIYSCLILQYMGQAAFLSKNLSAVPISFYASIPDVLFWPVFALAALAAIVASQAVISSTYSIVQQCHAFECFPRVKAIQSRRWINGQTYIPEINWILMVISLAVTVGFGDTGRIVYAYGIACLIVSFVTTCLTLLVINLVWHQSLIVAMAFLLFFGSIEVLFLSSYCVKIPIGGWVPIVLSSLFMVVMYVWHYGSRKKYFFDMHNKVSMRGVLALGPSLGIVRVPGMGLIYTELASGVPASFTHFLTNLPAFYQVVVFVCVKTVLVPSVPHAERYLIGRIGPKSYRLYRCIVRHGYKDVYSHENDFENELVMSIAEFIQLEAEGCSGNLDGTADGRMAVVRTSGKFGTRLRMSESAGVEEGDSNNLPGALTVTSSKSPTLKKLHAMYEQESLELNTRRRIKFELLNTIYRDPLVKEELMELVEANRAGAAYVIGHSHVKAKWNSSFMKKFAINLYSFLRKNCRSPAVGLNIPQTCLIKVGMNYHV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03620 791 NCBIfam potassium uptake protein 28 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g03620 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g03620 791 Pfam K+ potassium transporter 30 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03620 Vifa-Chr6 1192696670 1192704975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03620 17 791 Inorganic Solute Cotransporters AT4G23640 60.489 0.0 975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03620 K03549 - gmx:100777998 1332.78