Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03591 ATGATCATATCAGAGAAAAACCGCAAAGAAATCTGCAAATACCTCTTTCAAGAGGGTGTTTGCTATGCCAAGAAAGATTTCAATTTGCCAAAGCACCCAGAAATCGATGTTCCTAATTTGCAGGTGATTAAGCTTATGCAGAGCTTCAAATCAAGGGAGTATGTTAGGGAAACGTTTGCGTGGATGCATTATTACTGGTTCCTGACGAATGATGGAATTGAGTTTCTTAGGACTTACCTTAATCTTCCTTCTGAGATTGTGCCTGCTACTTTGAAGAAACAGGCTAAGCCTGCTGGGAGGCCTTTCGGTGGTCCACCCGGTGATCGCCCTAGGGGTCCACCAAGGTTTGAAGGTGAACGGAGATTTGGAGGTGATCGTGATGGGTACCGTGGAGGTCCGAGGGGACCTGGTGGTGAATTTGGTGGAGACAAGGGAGGTGCTCCTGCTGATTATAGACCCTCATTTGGGGGTCCTGGTGGAAGGCCTGGCTTTGGTCGTGGATCTGGTGGTTTTGGAGCACCAACAAGTTCAAATGATGCTTAA 543 0.4733 MIISEKNRKEICKYLFQEGVCYAKKDFNLPKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03591 180 MobiDBLite consensus disorder prediction 112 128 - -
Vifa6g03591 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 173 IPR037447 -
Vifa6g03591 180 Gene3D - 1 104 IPR036388 -
Vifa6g03591 180 FunFam 40S ribosomal protein S10 1 104 - -
Vifa6g03591 180 MobiDBLite consensus disorder prediction 91 180 - -
Vifa6g03591 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03591 Vifa-Chr6 1179370468 1179372633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03591 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.935 4.77e-75 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03591 K02947 - gmx:100500445 225.328