Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03554 ATGGAGTTCTGGTTCATTGCCCTAGTTTCAATATGTGTGGGCTTTCTCATCAGAGCCACCGTCTCCGCCGTCTCCGCCACCGGAGTAAACACGAAACGCGTAAGCCTCCCTCCCGGGCCGCTTCACATACCCATCCTATCAACCATTCTATGGCTTAGAAAATCCGTATCCCAGATTCAATCCTTCCTCCGAACCACCCATGCAAAATATGGTCCTATCATCAGTCTCCGAGTCGGTTACCGACCGATCATATTCATTTCCGACCGGTCAGTTGCTTACAATGCCCTAATCCAAAAATCCTCCGTCTTCTCTGACCGTCCTAAAGCACCTCCCAATATGAAGCTTATCTCCAGCAACCAACACACCATCAACTCCGCTTCTTATGGAGCGACATGGCGCACTCTCCGTCGTAACCTAGCCGCCGAGATGCTTCACCCGTCTCGCGCTAAGTCTTTCTCCGAGATTCGCCAATGGGTCCTTCAAACACTCCTCCACCGCCTTAAATCATCTTCTGAATCGTGTAACTCAATCAAAGTAGTTGACCACATTCAGTATGCAATGTTTTGTTTACTCGTTTTCATGTGTTATGGAGAAAGAGTTTATGATGAAAAAATCAATGACATTGAACGTGTACAACGTGCACTTTTGTTGAGTCTCAACAAATTCAACGTTCTGAATCACTTTCCGAAGATCACTAGGGTTTTGTTCCGGAAACGATGGGAGGAGTTGTTGAAGTTGAAACAAGATCAAGAGGATGTTCTACTTACACTGATAAGAGCAAGGAAGCAAGCAAAGGAAAGTGGATCATTCAAAAACAAGGTTGTTTCATATGTAGACACTCTTCTGGAATTGGAGTTACCTGAGGAGAAACGTAAATTGAATGAAGATGAAATGGTTAGTCTTTGTTCAGAGTTTTTGAATGCGGGCACAGACACAACCTCCACAGCTTTGCAATGGATCATGGCGAATTTGGTGAAGTATCCACAAGTGCAAGAGAAGATTATGGAGGAGCTTAAAACGGCGTTTGGCGCTGAAAGAACGGAAGAGAATGCTGAAGTGAAAGAGGAGGACTTGCACAAACTGCCGTATCTAAAGAGTGTGATATTGGAAGGATTGAGACGTCACCCACCAGGGCACTTTGTTTTGCCTCATACAGTTAAAGAAGATGTTGTCTTGAATGGCTATTTGGTCCCTAAAGATGGGATAGTGAACTTCATGGTGGCGGATATAGGGCGGGATCCTCGTGTTTGGGAGGATCCAATGGAGTTTAAGCCCGAAAGGTTTATGAAGGATGAGACATTTGATATTACTGGGAGTAAGGAAATAAAGATGATGCCATTTGGAGTTGGGAGGAGAATTTGTCCTGGATATAATTTAGCTATGCTTCATTTGGAATACTATGTGGCTAACTTGGTTTGGAATTTTGATTGGAAGCTTCCAGAGGGAGGGTATGTTGATTTGTCTGAAAAGCACGAGTTTACTGTGGTCATGAAGAATCCATTGCAGGTTCATATTTCTCCTAGGGTCTAG 1530 0.4425 MEFWFIALVSICVGFLIRATVSAVSATGVNTKRVSLPPGPLHIPILSTILWLRKSVSQIQSFLRTTHAKYGPIISLRVGYRPIIFISDRSVAYNALIQKSSVFSDRPKAPPNMKLISSNQHTINSASYGATWRTLRRNLAAEMLHPSRAKSFSEIRQWVLQTLLHRLKSSSESCNSIKVVDHIQYAMFCLLVFMCYGERVYDEKINDIERVQRALLLSLNKFNVLNHFPKITRVLFRKRWEELLKLKQDQEDVLLTLIRARKQAKESGSFKNKVVSYVDTLLELELPEEKRKLNEDEMVSLCSEFLNAGTDTTSTALQWIMANLVKYPQVQEKIMEELKTAFGAERTEENAEVKEEDLHKLPYLKSVILEGLRRHPPGHFVLPHTVKEDVVLNGYLVPKDGIVNFMVADIGRDPRVWEDPMEFKPERFMKDETFDITGSKEIKMMPFGVGRRICPGYNLAMLHLEYYVANLVWNFDWKLPEGGYVDLSEKHEFTVVMKNPLQVHISPRV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03554 509 CDD CYP77_89 69 502 - -
Vifa6g03554 509 SUPERFAMILY Cytochrome P450 37 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 Pfam Cytochrome P450 37 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vifa6g03554 509 Gene3D Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 FunFam Cytochrome P450 family protein 30 509 - -
Vifa6g03554 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 23 501 - -
Vifa6g03554 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g03554 509 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03554 Vifa-Chr6 1168380470 1168381999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03554 1 508 Cytochrome P450 AT1G64940 55.319 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03554 K24184 - gmx:100795683 711.449