Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03513 ATGAAGCTGAAAGTGTATGCGGACCGCATGTCCCAGCCATCCCGCGCGATTCTCATCTTTTGCAAAATCAATGGAATAGAATTTGAAGAGATCCATATCGAACTTTCCAAACGCCAGCATCTATCTCCCGAATTTCAAGCGATTAACCCTCTCAAGAAAGTTCCTGTTATTGTTGATGGAAGGTACAAGCTATTCGAAAGTCATGCAATTCTTATCTATATTGCTTCTGCATTTCCTGGAGTTGCAAACCATTGGTACCCAGCTGATGCTTCGAGGAAAGCTAAAATCCACTCAGTGTTAGATTGGCATCACCTGAATTTGCGCCGCGGAGCAGCCGGATATGTTCTAAATACTGTATTAGCTCCATTATTGGGTTTACCACTAAACGCACAAGCAGCTGCTGAAGCCGAGAAAGTTTTGGCATCATCTCTGTCCACAATAGAGAATATTTGGCTTAAGGGTGACGGACCGTTCTTGCTTGGCAGCTTTCGACCTTCCATAGCAGATCTCAGTCTTGTCTGTGAAATTATGCAATTACAGCTTTTAGACGAGAAGGATCATGATCGTATTATTGGCCCATACAAGAAAGTTCAACAGTGGATTGAGAGCACAAAAAATGCAACGAAGCCACATTTTGATGAAGTTCACAATGTCCTCTATAAGCTCAAAGCGAGGCTTTCAGTGCGGCAATCTAGTAAAGCAGATGGCCAAATTAAATCTGGGATTAAAGCTCCCATAGTTTCCAAGATGTGA 753 0.4276 MKLKVYADRMSQPSRAILIFCKINGIEFEEIHIELSKRQHLSPEFQAINPLKKVPVIVDGRYKLFESHAILIYIASAFPGVANHWYPADASRKAKIHSVLDWHHLNLRRGAAGYVLNTVLAPLLGLPLNAQAAAEAEKVLASSLSTIENIWLKGDGPFLLGSFRPSIADLSLVCEIMQLQLLDEKDHDRIIGPYKKVQQWIESTKNATKPHFDEVHNVLYKLKARLSVRQSSKADGQIKSGIKAPIVSKM 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03513 250 FunFam Glutathione S-transferase theta-1 83 231 - -
Vifa6g03513 250 CDD GST_C_Theta 92 222 IPR040077 -
Vifa6g03513 250 SFLD Glutathione Transferase (cytosolic) 1 225 IPR040079 -
Vifa6g03513 250 SFLD Main.4: Theta-like 1 225 - -
Vifa6g03513 250 SUPERFAMILY GST C-terminal domain-like 83 215 IPR036282 -
Vifa6g03513 250 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Vifa6g03513 250 Gene3D - 83 248 - -
Vifa6g03513 250 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vifa6g03513 250 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 235 IPR043377 -
Vifa6g03513 250 Gene3D Glutaredoxin 1 82 - -
Vifa6g03513 250 Pfam Glutathione S-transferase, C-terminal domain 131 202 - -
Vifa6g03513 250 CDD GST_N_Theta 3 78 IPR040075 -
Vifa6g03513 250 SUPERFAMILY Thioredoxin-like 1 87 IPR036249 -
Vifa6g03513 250 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 226 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03513 Vifa-Chr6 1156655060 1156663433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03513 1 230 Glutathione S-transferase Gene Family AT5G41210 71.304 3.66e-126 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03513 K00799 - gmx:547979 408.297