Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03512 ATGGAGAAGCTGAAGGTGTATGCAGATCGTATGTCCCAACCATCTCGAGCAGTTCTTATATTCTGCAGGTTGAATGGTATCGACTTTGAGGAGATCAAAATCGACATTTCCAAACGTCACCATCTATCTCCTGAATTCACAGATGTAAATCCTCTGCAGAAAGTTCCAGCTATTGTTCATGGAAACTTTAATCTCTTCGAGAGTCATGCAATCCTTGTCTATCTTGCTTCTGCTTTTCCTAGAATTGCTGATCATTGGTATCCAACTGATGTTTTGAGGAGAGCCAAAATTAACTCAGTATTGGATTGGCATCACTCTAATTTACGATATGGAGCAGTGAATTATGTAACAAATACGGTATTAGGACCTGCACTTGGCCGTCCACTGAATCCAAAAGCAGCTGCAGAAGCGGAGAAAGTTTTATCATCTTCTTTATCAAAACTAGAGGACATTTGGCTCAATGGAGATAGACTGTTCCTTCTTGGTGGCTTTCAACCGTCTATAGCAGATCTCAGCCTGGTTTGTGAACTCACACAACTTGAGCTTTTGGATGAGAAGGACCGTGATAGAAAATTATTCCCATACAAGAAAGTTCTTCGGTGGATTGAGGATACAAGAACTGCAACAAATCCCCACTTTGAACAAGTGCATGATATCCTTTATAGAGCCAAAAAGAAATTCCAGCAGCAGCGTTCAAGGGTAGCTAAAACTGGGACTGATAACAGTAGCAAGATGGGAACGCATTCTAAAATGTGA 756 0.4101 MEKLKVYADRMSQPSRAVLIFCRLNGIDFEEIKIDISKRHHLSPEFTDVNPLQKVPAIVHGNFNLFESHAILVYLASAFPRIADHWYPTDVLRRAKINSVLDWHHSNLRYGAVNYVTNTVLGPALGRPLNPKAAAEAEKVLSSSLSKLEDIWLNGDRLFLLGGFQPSIADLSLVCELTQLELLDEKDRDRKLFPYKKVLRWIEDTRTATNPHFEQVHDILYRAKKKFQQQRSRVAKTGTDNSSKMGTHSKM 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03512 251 FunFam Glutathione S-transferase theta-1 84 232 - -
Vifa6g03512 251 SFLD Main.4: Theta-like 3 231 - -
Vifa6g03512 251 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 227 IPR010987 -
Vifa6g03512 251 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Vifa6g03512 251 CDD GST_N_Theta 4 79 IPR040075 -
Vifa6g03512 251 FunFam Glutathione S-transferase theta-1 2 81 - -
Vifa6g03512 251 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Vifa6g03512 251 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 3 244 IPR043377 -
Vifa6g03512 251 SFLD Main (cytGST) 3 231 - -
Vifa6g03512 251 MobiDBLite consensus disorder prediction 229 251 - -
Vifa6g03512 251 Gene3D - 83 244 - -
Vifa6g03512 251 MobiDBLite consensus disorder prediction 232 251 - -
Vifa6g03512 251 SUPERFAMILY GST C-terminal domain-like 84 216 IPR036282 -
Vifa6g03512 251 SUPERFAMILY Thioredoxin-like 1 81 IPR036249 -
Vifa6g03512 251 Gene3D Glutaredoxin 3 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03512 Vifa-Chr6 1156652280 1156654035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03512 1 251 Glutathione S-transferase Gene Family AT5G41210 64.940 5.22e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03512 K00799 - gmx:100799229 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03512 6 1156652280 1156654035 Vifa6g03512 6 1156652280 1156654035 ECH