Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03486 ATGTGCGTAAACCTAAATCAGAACTTGCAATCGAAAGTGAGACTCATATCAAAACGGCTGCTTAGGGTTACTCTTTCTCTCTCTTTCCTTTACTTCTGGGCTACGAGTGCGGGAATCACGAGGGGTGCTTCTTCTTCTACAAAAATCAACATGGATCAGGATGGGACCCAAAGTAATGTTAAAAAGCCAGTGTGGCTTGAGGATTTTCTAGAGAGAAAATTCTTTGGCTCATGTTCTCTTCACCAGACTCGTAGAAATCAGTTAAATAAGTACTGTATTTATTGCAATAAGTTATGCTGTCAATTTTGTGTATCTTTTGGTCTCCATCGCCATCATAAGTTGCTTAAAGTGTCTAGACATGTTAACAAGGATGTTGTCTCCCTGCGTGCAATTGAGAATTACTTTGATTGTTCCCAAATTCAGACATACAAATGCAACAAGCGATTGGTTGTTTCTCGGAATCCTCTCGAAGTCTTTGAGTTATCATCAAATGTTGAAGAATCATGCAAAGTTTGCAAAAAAAAGTTTAATGCACCTCATTTATATAGCTACTGCTCCATTTCTTGCAAGGTTGTAGCACTTGAGAAAAAGCCTGCACCTGAGGATCCTGCTAGCATAATAATAATTGAGTCTTCCTCGGGACCTTCTCTCGAGAGTCGTCCTCGTCCTCGTCCTCGTCCTCTTCCCCGGCAAACACAGGAGATAACTTCTGAACCTTCCAAAAGGAAAAGGAAAAGAAAGGGAAGCCCCCATAGAAGCCCCTTACAATAA 771 0.4099 MCVNLNQNLQSKVRLISKRLLRVTLSLSFLYFWATSAGITRGASSSTKINMDQDGTQSNVKKPVWLEDFLERKFFGSCSLHQTRRNQLNKYCIYCNKLCCQFCVSFGLHRHHKLLKVSRHVNKDVVSLRAIENYFDCSQIQTYKCNKRLVVSRNPLEVFELSSNVEESCKVCKKKFNAPHLYSYCSISCKVVALEKKPAPEDPASIIIIESSSGPSLESRPRPRPRPLPRQTQEITSEPSKRKRKRKGSPHRSPLQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03486 256 ProSiteProfiles Zinc finger B-box type profile. 78 117 IPR000315 GO:0008270
Vifa6g03486 256 Pfam PLATZ transcription factor 119 191 IPR006734 -
Vifa6g03486 256 Gene3D Classic Zinc Finger 72 134 - -
Vifa6g03486 256 MobiDBLite consensus disorder prediction 242 256 - -
Vifa6g03486 256 SUPERFAMILY B-box zinc-binding domain 77 125 - -
Vifa6g03486 256 CDD Bbox2 78 117 - -
Vifa6g03486 256 MobiDBLite consensus disorder prediction 206 256 - -
Vifa6g03486 256 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 58 255 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vifa6g03486 PLATZ 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03486 - - tpra:123915973 203.371