Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03447 ATGGAGAAACATGAAGTGTTATTGCCTAGCTCATCTTCACTTGATGCTTCTCCTTTTGAAGCTAATCCCAGTAGTGGTTCTAATGTTCATGTTCAAAGTGAAGAATTTCTAAAATCTAAAAGAAAGGAGACATTGAGTGAAAGAAGAGGCAAAGAAATCATGAAGCACAAATATGTATTTCAAACAAGGAGTCAGATTGATAAATTAGACGATGGGTTCAGGTGGAGAAAGTATGGGGAAAAGTTGGTGAAAAATAGCAAATTCCCCAGGAGTTACTACAAATGCTCTTATCGAGGATGCAATGTAAGAAAACACATCCAAAGACATTCCAAAGATGAGCAGATCGTGGAAACAACTTACGAAGGGATGCATGTTCACCCAGTCGAGAAGTCGGCTGAAAGCTTTGATCAGATCTTGAGAAGCTTTATTACAAGCAATCAACTAAACAATGTAACTCTAATATAA 465 0.372 MEKHEVLLPSSSSLDASPFEANPSSGSNVHVQSEEFLKSKRKETLSERRGKEIMKHKYVFQTRSQIDKLDDGFRWRKYGEKLVKNSKFPRSYYKCSYRGCNVRKHIQRHSKDEQIVETTYEGMHVHPVEKSAESFDQILRSFITSNQLNNVTLI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03447 154 FunFam WRKY transcription factor 57 55 129 - -
Vifa6g03447 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 29 133 IPR044810 GO:0003700
Vifa6g03447 154 Pfam WRKY DNA -binding domain 70 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa6g03447 154 MobiDBLite consensus disorder prediction 1 48 - -
Vifa6g03447 154 MobiDBLite consensus disorder prediction 10 33 - -
Vifa6g03447 154 ProSiteProfiles WRKY domain profile. 64 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa6g03447 154 SMART WRKY_cls 69 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa6g03447 154 MobiDBLite consensus disorder prediction 34 48 - -
Vifa6g03447 154 Gene3D WRKY domain 56 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa6g03447 154 SUPERFAMILY WRKY DNA-binding domain 61 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03447 Vifa-Chr6 1137149726 1137150320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03447 57 139 WRKY Transcription Factor Family AT5G13080 66.265 1.88e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifa6g03447 WRKY 4.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03447 - - mtr:25502011 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03447 6 1137149726 1137150320 Vifa6g03447 6 1137149726 1137150320 ECH