Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03437 ATGAATTTGGTGAAGAAGTGTAAGAGGGTATGGGCAAGCAGAAAGAGATTGTATGATCCACAAGGCAGTAGTAGAAGTGGTAGCTATGGAAAATTATCAGACAAGTGTCACAAAAAGCAAAAAGATAATACTAAGAAACCACCAAATGGTTGTGTTTGTGTCTATGTTGGAGCTGAGAGACAAAGATTCATAATCAAGATCAAAATATTCAATCACCCTTTATTCAAAACGTTTTTGGAAGATGTTGAGGATGAGTATGGTTATAGAAACGATGGTCCTCTATGGCTTCCTTGTGAGGTTGACTTGTTCTATGAAGCACTTGTGGAGATAGAAAGTGCTGAAGATGATATGGCTTTTGTGGGATGCAAGTTTCCAATAGGTCACAAACACAGTTCAGTTTCACAATATTTTTCATTTTCTTGTCGTTCTAACGTGAGTTCATGTGATGCCAATTACGAGGTTTTGGTATAA 471 0.3715 MNLVKKCKRVWASRKRLYDPQGSSRSGSYGKLSDKCHKKQKDNTKKPPNGCVCVYVGAERQRFIIKIKIFNHPLFKTFLEDVEDEYGYRNDGPLWLPCEVDLFYEALVEIESAEDDMAFVGCKFPIGHKHSSVSQYFSFSCRSNVSSCDANYEVLV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03437 156 MobiDBLite consensus disorder prediction 18 46 - -
Vifa6g03437 156 Pfam Auxin responsive protein 24 107 IPR003676 GO:0009733
Vifa6g03437 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 107 IPR003676 GO:0009733
Vifa6g03437 156 MobiDBLite consensus disorder prediction 31 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03437 Vifa-Chr6 1131063894 1131064364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03437 48 114 Calmodulin-binding Proteins AT4G34750 40.299 2.56e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03437 K14488 - gmx:102667331 141.354